Co-expression analysis

Gene ID	GmaAffx.90414.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At5g20500: glutaredoxin, putative (HF=4e+0)
Module size	41 genes
NF	0.47
%ile	78.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.96	99.6	0.90	GmaAffx.90414.1.S1_at	CF806139	-	-	4e+0	At5g20500	glutaredoxin, putative	O.I.	H.G.	S.X.	Please select
0.65	83.8	0.93	Gma.3604.4.S1_s_at	BI317410	-	-	5e-8	At4g34050	caffeoyl-CoA 3-O-methyltransferase, putative	O.I.	H.G.	S.X.	Please select
0.65	83.8	0.95	Gma.5491.2.S1_at	BF425401	-	-	3e+0	At5g59570	myb family transcription factor	O.I.	H.G.	S.X.	Please select
0.63	82.9	0.94	Gma.8401.1.A1_at	BU547972	-	-	3e-1	At3g26170	CYP71B19	O.I.	H.G.	S.X.	Please select
0.59	79.5	0.95	GmaAffx.89508.1.A1_s_at	CK606172	-	-	4e-1	At3g10340	PAL4 (Phenylalanine ammonia-lyase 4)	O.I.	H.G.	S.X.	Please select
0.58	78.8	0.93	GmaAffx.91782.1.S1_s_at	CF807507	-	-	2e-4	At3g01420	DOX1	O.I.	H.G.	S.X.	Please select
0.57	78.8	0.94	GmaAffx.78965.1.S1_s_at	BI424889	-	-	3e+0	At5g61605	unknown protein	O.I.	H.G.	S.X.	Please select
0.57	78.8	0.93	GmaAffx.91141.1.S1_at	CF806866	-	-	1e-1	At5g66390	peroxidase 72 (PER72) (P72) (PRXR8)	O.I.	H.G.	S.X.	Please select
0.55	76.3	0.92	Gma.16812.1.S1_x_at	AF007211.1	peroxidase, pathogen-induced	-	1e-2	At5g19890	peroxidase, putative	O.I.	H.G.	S.X.	Please select
0.55	76.3	0.93	Gma.12863.1.S1_at	BI967228	-	-	2e-23	At3g01420	DOX1	O.I.	H.G.	S.X.	Please select
0.54	74.8	0.93	Gma.15664.1.S1_at	BM269655	-	-	7e-1	At2g27790	nucleic acid binding / nucleotide binding	O.I.	H.G.	S.X.	Please select
0.53	74.2	0.94	GmaAffx.92070.1.S1_at	CF807049	-	-	3e-8	At4g34050	caffeoyl-CoA 3-O-methyltransferase, putative	O.I.	H.G.	S.X.	Please select
0.52	73.1	0.94	GmaAffx.48942.1.S1_at	BE023109	-	-	9e+0	Atcg00820	-	O.I.	H.G.	S.X.	Please select
0.52	73.1	0.94	GmaAffx.36619.1.S1_at	BI698968	-	-	2e-1	At5g22680	-	O.I.	H.G.	S.X.	Please select
0.50	71.7	0.93	Gma.8449.1.S1_at	AF002258.1	4-coumarate:CoA ligase isoenzyme 3	-	2e-14	At1g65060	4CL3	O.I.	H.G.	S.X.	Please select
0.49	68.3	0.94	GmaAffx.93301.2.S1_s_at	CF808497	2'-hydroxydihydrodaidzein reductase	-	1e-11	At4g05050	UBQ11 (UBIQUITIN 11)	O.I.	H.G.	S.X.	Please select
0.49	68.3	0.95	GmaAffx.93392.1.S1_s_at	CF807760	-	-	2e-5	At5g42510	disease resistance-responsive family protein	O.I.	H.G.	S.X.	Please select
0.49	68.3	0.94	GmaAffx.92557.1.S1_s_at	CF806245	-	-	2e-6	At4g23270	protein kinase family protein	O.I.	H.G.	S.X.	Please select
0.49	68.3	0.96	Gma.5491.1.S1_at	AW309940	-	-	1e+1	At5g51105	unknown protein	O.I.	H.G.	S.X.	Please select
0.49	68.3	0.96	Gma.4300.3.S1_x_at	AI443042	chalcone synthase	-	1e-5	At5g13930	TT4 (TRANSPARENT TESTA 4)	O.I.	H.G.	S.X.	Please select
0.48	67.7	0.93	Gma.7519.1.A1_at	BU548284	-	-	4e-1	At4g21366	ATP binding / protein tyrosine kinase	O.I.	H.G.	S.X.	Please select
0.47	66.6	0.96	Gma.4300.3.S1_s_at	AI443042	chalcone synthase	-	1e-5	At5g13930	TT4 (TRANSPARENT TESTA 4)	O.I.	H.G.	S.X.	Please select
0.47	66.6	0.95	GmaAffx.92722.1.S1_at	CF807561	2-hydroxyisoflavanone dehydratase	-	6e-1	At2g30050	transducin family protein / WD-40 repeat family protein	O.I.	H.G.	S.X.	Please select
0.46	65.5	0.95	Gma.6727.1.S1_at	Y10493.1	-	-	9e-1	At3g26270	CYP71B25	O.I.	H.G.	S.X.	Please select
0.46	65.5	0.92	GmaAffx.1841.1.A1_at	BU548501	-	-	2e-1	At3g58780	SHP1 (SHATTERPROOF 1)	O.I.	H.G.	S.X.	Please select
0.45	63.9	0.93	GmaAffx.92491.1.S1_s_at	CF808255	chalcone synthase 1	-	5e-17	At5g13930	TT4 (TRANSPARENT TESTA 4)	O.I.	H.G.	S.X.	Please select
0.45	63.9	0.95	Gma.8449.1.S1_s_at	AF002258.1	4-coumarate:Coenzyme A ligase isoenzyme 4 /// 4-coumarate:CoA ligase isoenzyme 3	-	2e-14	At1g65060	4CL3	O.I.	H.G.	S.X.	Please select
0.43	60.6	0.94	GmaAffx.91459.1.S1_at	CF807184	-	-	2e+0	At3g44140	unknown protein	O.I.	H.G.	S.X.	Please select
0.42	59.3	0.96	GmaAffx.91013.1.S1_s_at	CF806738	-	-	5e+0	At5g51105	unknown protein	O.I.	H.G.	S.X.	Please select
0.40	57.1	0.96	Gma.4300.1.S1_s_at	S46989.1	chalcone synthase	-	5e-29	At5g13930	TT4 (TRANSPARENT TESTA 4)	O.I.	H.G.	S.X.	Please select
0.39	54.5	0.94	Gma.4470.1.S1_s_at	AW156251	-	-	2e+0	At5g41401	unknown protein	O.I.	H.G.	S.X.	Please select
0.39	54.5	0.95	GmaAffx.37677.1.S1_s_at	BE022626	HIDH mRNA for 2-hydroxyisoflavanone dehydratase	-	3e-1	At2g30050	transducin family protein / WD-40 repeat family protein	O.I.	H.G.	S.X.	Please select
0.39	54.5	0.94	GmaAffx.93133.1.S1_s_at	CF806755	-	-	4e-1	At2g12880	zinc knuckle (CCHC-type) family protein	O.I.	H.G.	S.X.	Please select
0.38	53.3	0.94	Gma.7728.1.S1_at	BI942310	-	-	8e-25	At3g21500	1-deoxy-D-xylulose-5-phosphate synthase	O.I.	H.G.	S.X.	Please select
0.38	53.3	0.96	GmaAffx.90356.1.S1_s_at	CF806081	-	-	1e-3	At4g13660	PRR2 (PINORESINOL REDUCTASE 2)	O.I.	H.G.	S.X.	Please select
0.31	42.2	0.92	GmaAffx.92458.1.S1_at	CF808183	-	-	2e-21	At3g21500	1-deoxy-D-xylulose-5-phosphate synthase	O.I.	H.G.	S.X.	Please select
0.29	39.0	0.94	Gma.3639.1.S1_at	AB083030.1	syringolide-induced protein B15-3-5	-	1e-4	At2g38600	acid phosphatase class B family protein	O.I.	H.G.	S.X.	Please select
0.29	39.0	0.96	GmaAffx.91944.1.S1_s_at	CF808330	NAD(P)H dependent 6'-deoxychalcone synthase	-	4e-2	At4g37690	galactosyl transferase GMA12/MNN10 family protein	O.I.	H.G.	S.X.	Please select
0.28	39.0	0.96	Gma.6602.2.S1_s_at	BI320883	-	-	4e-103	At5g16440	IPP1 (ISOPENTENYL DIPHOSPHATE ISOMERASE 1)	O.I.	H.G.	S.X.	Please select
0.26	33.9	0.95	Gma.3810.1.S1_s_at	BI972063	-	-	3e+0	At3g50220	unknown protein	O.I.	H.G.	S.X.	Please select
0.23	29.9	0.96	Gma.11238.1.S1_at	BQ454110	-	-	3e-121	At5g60600	HDS (4-HYDROXY-3-METHYLBUT-2-ENYL DIPHOSPHATE SYNTHASE)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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