Co-expression analysis

Gene ID GmaAffx.89972.1.S1_s_at
Gene name
Homology with ArabidopsisSimilar to At2g43590: chitinase, putative (HF=6e-5)
Module size 25 genes
NF 0.48
%ile 79.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8993.50.90GmaAffx.89972.1.S1_s_atCF805697--6e-5At2g43590chitinase, putativeO.I.H.G.S.X.
0.7187.80.95GmaAffx.18924.1.S1_atBU546215--1e-5At2g18950HPT1 (HOMOGENTISATE PHYTYLTRANSFERASE 1)O.I.H.G.S.X.
0.6483.40.93GmaAffx.42847.1.S1_s_atBU578388--5e-12At2g14580ATPRB1O.I.H.G.S.X.
0.6181.80.92GmaAffx.494.1.S1_atAI938330--1e+0At5g41420unknown proteinO.I.H.G.S.X.
0.6080.70.92GmaAffx.36484.1.S1_s_atBI425441--3e-5At2g14580ATPRB1O.I.H.G.S.X.
0.5979.50.91GmaAffx.90538.1.A1_s_atCF806263--8e-2At2g24810pathogenesis-related thaumatin family proteinO.I.H.G.S.X.
0.5678.20.92GmaAffx.18769.1.S1_atBI972364--3e+0At2g24285-O.I.H.G.S.X.
0.5576.30.93GmaAffx.41414.1.S1_s_atBU766008--3e+0At5g65940CHY1 (BETA-HYDROXYISOBUTYRYL-COA HYDROLASE 1)O.I.H.G.S.X.
0.5374.20.95GmaAffx.55244.2.S1_atBI893826--1e-3At5g49700DNA-binding protein-relatedO.I.H.G.S.X.
0.5273.10.92GmaAffx.52146.1.S1_atCA934966--2e-4At3g04720PR4 (PATHOGENESIS-RELATED 4)O.I.H.G.S.X.
0.5172.30.93GmaAffx.69694.1.S1_atBQ785570--3e+0At3g26980MUB4 (MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 4 PRECURSOR)O.I.H.G.S.X.
0.4968.30.93Gma.3713.1.S1_s_atBI469834--1e-1At5g53050hydrolase, alpha/beta fold family proteinO.I.H.G.S.X.
0.4867.70.94Gma.7559.1.S1_s_atBG509205--1e-3At2g41680NTRC (NADPH-DEPENDENT THIOREDOXIN REDUCTASE C)O.I.H.G.S.X.
0.4665.50.94GmaAffx.74033.1.S1_s_atBM093124--2e-11At1g79750ATNADP-ME4 (NADP-malic enzyme 4)O.I.H.G.S.X.
0.4563.90.93GmaAffx.92921.1.S1_atCF807404--4e-1At2g31790UDP-glucoronosyl/UDP-glucosyl transferase family proteinO.I.H.G.S.X.
0.4463.30.93GmaAffx.46214.4.S1_atAI460836--4e+0At5g35405-O.I.H.G.S.X.
0.4360.60.95Gma.16709.2.S1_s_atBU579309--6e-3At5g36220CYP81D1 (CYTOCHROME P450 81D1)O.I.H.G.S.X.
0.4158.10.95PsAffx.psHB005xC21f_atPsAffx.psHB005xC21f--7e-11At3g53720ATCHX20 (CATION/H+ EXCHANGER 20)O.I.H.G.S.X.
0.4057.10.94GmaAffx.78456.1.S1_atBQ081108--4e-6At2g46750FAD-binding domain-containing proteinO.I.H.G.S.X.
0.3954.50.93Gma.7631.1.A1_atAW309495--4e-13At5g11670ATNADP-ME2 (NADP-malic enzyme 2)O.I.H.G.S.X.
0.3751.70.92GmaAffx.93314.1.S1_s_atCF809039--1e-3At5g49040disease resistance-responsive protein-related / dirigent protein-relatedO.I.H.G.S.X.
0.3650.80.95Gma.2821.2.S1_a_atBI469945PR-5 protein-2e-2At4g11650ATOSM34 (osmotin 34)O.I.H.G.S.X.
0.3548.60.94GmaAffx.92699.1.S1_s_atCF808424PR-5 protein-2e+1At5g42860unknown proteinO.I.H.G.S.X.
0.2939.00.93Gma.6719.3.S1_s_atAW164562--4e-1At5g18540unknown proteinO.I.H.G.S.X.
0.2532.60.94GmaAffx.93133.1.S1_s_atCF806755--4e-1At2g12880zinc knuckle (CCHC-type) family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.696.7GSM29354660_2021.2A.R275L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.596.6GSM29375688_2113.2C.R285L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.596.6GSM29355367_3017.2A.R9A3L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.496.4GSM29427226_2427.2I.R297L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.496.4GSM29324835_1155.1P.R097L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.496.4GSM29301520_1089.1N.R055L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.296.0GSM29415116_3139.2H.R9H3L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.296.0GSM29322615_C065.1P.R9P2L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.296.0GSM29329477_C067.1P.R9P3L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.296.0GSM29374073_2127.2C.R132L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.296.0GSM2930807_C033.1N.R9N3L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.195.8GSM29284524_1445.1L.R272L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.195.8GSM29340890_C079.1Q.R9Q2L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.195.8GSM29423887_2337.2H.R240L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.195.8GSM2935779_3009.2A.R9A2L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.195.8GSM29426622_2417.2I.R236L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.195.8GSM29416932_3137.2H.R9H2L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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