Co-expression analysis

Gene ID	GmaAffx.89525.1.S1_s_at
Gene name
Homology with Arabidopsis	Similar to At2g39840: TOPP4 (HF=3e-26)
Module size	9 genes
NF	0.55
%ile	86.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.60	80.7	0.99	GmaAffx.89525.1.S1_s_at	CK606517	-	-	3e-26	At2g39840	TOPP4	O.I.	H.G.	S.X.	Please select
0.80	91.5	0.99	GmaAffx.85171.1.S1_at	BU091668	-	-	7e-6	At5g10710	protein binding	O.I.	H.G.	S.X.	Please select
0.67	86.1	0.99	Gma.6104.2.S1_at	BI320811	-	-	3e-20	At5g63260	zinc finger (CCCH-type) family protein	O.I.	H.G.	S.X.	Please select
0.63	82.9	0.99	Gma.18012.1.S1_at	BM568411	-	-	8e-28	At4g36690	ATU2AF65A	O.I.	H.G.	S.X.	Please select
0.53	74.2	0.99	GmaAffx.22932.1.S1_at	BI316684	-	-	1e-28	At2g01060	myb family transcription factor	O.I.	H.G.	S.X.	Please select
0.53	74.2	0.99	Gma.6104.1.S1_x_at	BU760692	-	-	8e-3	At3g48440	zinc finger (CCCH-type) family protein	O.I.	H.G.	S.X.	Please select
0.43	60.6	0.99	Gma.1995.1.S1_at	AW164508	-	-	4e-23	At3g12760	-	O.I.	H.G.	S.X.	Please select
0.38	53.3	0.99	Gma.6104.2.S1_a_at	BI320811	-	-	3e-20	At5g63260	zinc finger (CCCH-type) family protein	O.I.	H.G.	S.X.	Please select
0.31	42.2	0.99	Gma.5720.1.S1_s_at	AW348669	-	-	4e-5	At1g51200	zinc finger (AN1-like) family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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