Co-expression analysis

Gene ID GmaAffx.89500.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At5g48860: unknown protein (HF=1e+1)
Module size 8 genes
NF 0.29
%ile 55.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5071.70.93GmaAffx.89500.1.A1_atCK605776--1e+1At5g48860unknown proteinO.I.H.G.S.X.
0.3751.70.94HgAffx.16208.1.S1_atCB935526--5e+0At5g55750hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.
0.3243.70.94HgAffx.8265.1.S1_atCB380236--5e+0At5g160103-oxo-5-alpha-steroid 4-dehydrogenase family protein / steroid 5-alpha-reductase family proteinO.I.H.G.S.X.
0.3040.40.94PsAffx.C162000008_atPsAffx.C162000008--8e-2At5g08160ATPK3O.I.H.G.S.X.
0.2329.90.94HgAffx.9055.1.S1_atCB379446--2e+0At5g49015Expressed proteinO.I.H.G.S.X.
0.2329.90.94PsAffx.C122000010_atPsAffx.C122000010--6e-1At4g16240unknown proteinO.I.H.G.S.X.
0.2329.90.94PsAffx.C34000064_atPsAffx.C34000064--2e+0At5g29560calcium ion bindingO.I.H.G.S.X.
0.2126.60.94PsAffx.C1000091_atPsAffx.C1000091--4e-1At2g21490LEA (DEHYDRIN LEA)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
8.399.1GSM29292395_1465.1L.R283L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
6.698.7GSM308556Mature Soybean (Glycine max) pollen grains replicate 1GSE12286Genomic Expression Profiling of Mature Soybean (Glycine max) PollenLink to GEO
6.598.7GSM29426823_2428.2I.R297P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
6.498.6GSM29244849_C110.1G.V7G1P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
5.598.3GSM29283818_C211.1L.SLL3L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
4.797.8GSM29308281_C019.1N.R9N1U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.997.1GSM24481318_VP9.I5U4.CEL, Experimental replicate 4GSE9687Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistanceLink to GEO
3.296.0GSM191087Soybean_Cotyledon_II1GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stageLink to GEO
3.195.8GSM29364168_2065.2B.R129U, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.195.8GSM29319577_1130.1O.R082P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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