Co-expression analysis

Gene ID GmaAffx.89425.1.A1_s_at
Gene name
Homology with ArabidopsisSimilar to At5g05110: cysteine protease inhibitor, putative / cystatin, putative (HF=4e-1)
Module size 13 genes
NF 0.71
%ile 95.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7589.50.84GmaAffx.89425.1.A1_s_atCK606255--4e-1At5g05110cysteine protease inhibitor, putative / cystatin, putativeO.I.H.G.S.X.
0.8191.70.90GmaAffx.89665.1.A1_s_atCK606059--5e+0At3g17350unknown proteinO.I.H.G.S.X.
0.7790.30.89soybean_rRNA_1721_atsoybean_rRNA_1721--1e+0At3g56290unknown proteinO.I.H.G.S.X.
0.7288.10.91soybean_rRNA_1692_atsoybean_rRNA_1692--2e+1Atmg00030-O.I.H.G.S.X.
0.7288.10.92soybean_rRNA_1665_atsoybean_rRNA_1665--2e-2At3g50390transducin family protein / WD-40 repeat family proteinO.I.H.G.S.X.
0.7288.10.92Gma.17620.1.S1_s_atAI736755--2e+1At5g67490unknown proteinO.I.H.G.S.X.
0.7087.10.93PsAffx.CL3Contig2_s_atPsAffx.CL3Contig2--3e+0At5g35520MIS12 (MINICHROMOSOME INSTABILITY 12 (MIS12)-LIKE)O.I.H.G.S.X.
0.6986.80.93GmaAffx.89786.1.A1_s_atCK605840--7e+0At5g09711unknown proteinO.I.H.G.S.X.
0.6786.10.91soybean_rRNA_718_atsoybean_rRNA_718--2e+1At1g07350transformer serine/arginine-rich ribonucleoprotein, putativeO.I.H.G.S.X.
0.6583.80.85soybean_rRNA_918_RC_atsoybean_rRNA_918_RC--5e+0At5g48657defense protein-relatedO.I.H.G.S.X.
0.6583.80.90soybean_rRNA_838_atsoybean_rRNA_838--1e+0At4g27700rhodanese-like domain-containing proteinO.I.H.G.S.X.
0.5678.20.86soybean_rRNA_1692_RC_atsoybean_rRNA_1692_RC--2e+1Atmg00030-O.I.H.G.S.X.
0.5576.30.82GmaAffx.1301.14.S1_s_atBE822937--5e+0At5g50440MEMB12 (MEMBRIN 12)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
15.899.6GSM147938Laser capture microdissected (LCM) suspensor at the globular stage, biological replicate 3GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
13.699.5GSM147940Laser capture microdissected (LCM) endosperm at the globular stage, biological replicate 2GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
12.499.5GSM182032Laser capture microdissected (LCM) suspensor at the heart stage, biological replicate 1GSE7511Expression data from soybean seed compartments with embryos at the heart stageLink to GEO
12.099.4GSM147939Laser capture microdissected (LCM) endosperm at the globular stage, biological replicate 1GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
11.899.4GSM182035Laser capture microdissected (LCM) endosperm at the heart stage, biological replicate 1GSE7511Expression data from soybean seed compartments with embryos at the heart stageLink to GEO
9.899.3GSM147935Laser capture microdissected (LCM) embryo proper at the globular stage, biological replicate 3GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
7.398.9GSM182037Laser capture microdissected (LCM) endothelium at the heart stage, biological replicate 1GSE7511Expression data from soybean seed compartments with embryos at the heart stageLink to GEO
6.898.7GSM147941Laser capture microdissected (LCM) endosperm at the globular stage, biological replicate 3GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
6.698.7GSM147946Laser capture microdissected (LCM) epidermis at the globular stage, biological replicate 2GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
6.698.7GSM147937Laser capture microdissected (LCM) suspensor at the globular stage, biological replicate 2GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
6.598.7GSM147947Laser capture microdissected (LCM) epidermis at the globular stage, biological replicate 3GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
6.398.6GSM147945Laser capture microdissected (LCM) epidermis at the globular stage, biological replicate 1GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
6.298.6GSM201098Laser capture microdissected (LCM) axis plumule at the early maturation stage, biological replicate 1GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
6.298.6GSM201096Laser capture microdissected (LCM) axis epidermis at the early maturation stage, biological replicate 1GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
6.098.5GSM182044Laser capture microdissected (LCM) inner integument at the heart stage, biological replicate 2GSE7511Expression data from soybean seed compartments with embryos at the heart stageLink to GEO
5.898.4GSM201106Laser capture microdissected (LCM) axis vascular bundle at the early maturation stage, biological replicate 1GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
5.898.4GSM201099Laser capture microdissected (LCM) axis plumule at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
5.898.4GSM182043Laser capture microdissected (LCM) inner integument at the heart stage, biological replicate 1GSE7511Expression data from soybean seed compartments with embryos at the heart stageLink to GEO
5.798.4GSM201118Laser capture microdissected (LCM) seed coat aleurone at the early maturation stage, biological replicate 1GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
5.798.4GSM201097Laser capture microdissected (LCM) axis epidermis at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
5.698.3GSM182039Laser capture microdissected (LCM) epidermis at the heart stage, biological replicate 1GSE7511Expression data from soybean seed compartments with embryos at the heart stageLink to GEO
5.698.3GSM191089Soybean_Cotyledon_OI1GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stageLink to GEO
5.598.3GSM182040Laser capture microdissected (LCM) epidermis at the heart stage, biological replicate 2GSE7511Expression data from soybean seed compartments with embryos at the heart stageLink to GEO
5.298.1GSM147951Laser capture microdissected (LCM) inner integument at the globular stage, biological replicate 1GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
5.298.1GSM182029Laser capture microdissected (LCM) embryo proper at the heart stage, biological replicate 1GSE7511Expression data from soybean seed compartments with embryos at the heart stageLink to GEO
5.198.1GSM147949Laser capture microdissected (LCM) hilum at the globular stage, biological replicate 2GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
5.098.0GSM182036Laser capture microdissected (LCM) endosperm at the heart stage, biological replicate 2GSE7511Expression data from soybean seed compartments with embryos at the heart stageLink to GEO
5.098.0GSM201104Laser capture microdissected (LCM) axis shoot meristem at the early maturation stage, biological replicate 1GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
4.998.0GSM201103Laser capture microdissected (LCM) axis root meristem at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
4.897.9GSM147952Laser capture microdissected (LCM) inner integument at the globular stage, biological replicate 2GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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