Co-expression analysis

Gene ID	GmaAffx.8854.1.S1_at
Gene name	transcription factor bZIP112
Homology with Arabidopsis	Similar to At2g42380: bZIP transcription factor family protein (HF=2e-29)
Module size	22 genes
NF	0.49
%ile	80.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.6	0.95	GmaAffx.8854.1.S1_at	AI496452	transcription factor bZIP112	-	2e-29	At2g42380	bZIP transcription factor family protein	O.I.	H.G.	S.X.	Please select
0.71	87.8	0.97	GmaAffx.9280.1.S1_at	BI498912	-	-	2e-1	At5g12480	CPK7 (calmodulin-domain protein kinase 7)	O.I.	H.G.	S.X.	Please select
0.71	87.8	0.98	GmaAffx.15951.1.S1_at	BU761641	-	-	3e+0	At5g05060	-	O.I.	H.G.	S.X.	Please select
0.67	86.1	0.95	GmaAffx.34714.1.S1_at	BE820257	-	-	5e+0	At2g05310	unknown protein	O.I.	H.G.	S.X.	Please select
0.67	86.1	0.97	GmaAffx.37081.1.S1_at	BM178013	-	-	4e-12	At1g76490	HMG1 (HYDROXY METHYLGLUTARYL COA REDUCTASE 1)	O.I.	H.G.	S.X.	Please select
0.63	82.9	0.97	GmaAffx.52305.1.A1_at	CD407224	-	-	2e-1	At1g25230	purple acid phosphatase family protein	O.I.	H.G.	S.X.	Please select
0.61	81.8	0.98	GmaAffx.61072.3.S1_at	CA783097	-	-	2e-7	At3g24620	ROPGEF8	O.I.	H.G.	S.X.	Please select
0.61	81.8	0.98	GmaAffx.38185.1.S1_at	BU964806	-	-	9e-1	At5g13160	PBS1 (avrPphB susceptible 1)	O.I.	H.G.	S.X.	Please select
0.60	80.7	0.97	GmaAffx.37988.1.S1_at	BF324942	-	-	8e-1	At5g43185	Expressed protein	O.I.	H.G.	S.X.	Please select
0.58	78.8	0.97	GmaAffx.51022.1.S1_at	BM519886	-	-	9e-1	At3g25920	RPL15	O.I.	H.G.	S.X.	Please select
0.55	76.3	0.98	GmaAffx.84099.1.A1_at	CD404788	-	-	2e+0	At5g55950	transporter-related	O.I.	H.G.	S.X.	Please select
0.53	74.2	0.98	GmaAffx.70497.1.A1_at	CD399272	-	-	5e-1	At1g11820	catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds	O.I.	H.G.	S.X.	Please select
0.46	65.5	0.98	GmaAffx.62196.1.S1_at	BI426451	-	-	5e-30	At5g44340	TUB4	O.I.	H.G.	S.X.	Please select
0.40	57.1	0.98	GmaAffx.66228.1.S1_at	AW100854	-	-	2e-4	At4g28150	unknown protein	O.I.	H.G.	S.X.	Please select
0.39	54.5	0.98	GmaAffx.5228.1.S1_at	BM309361	-	-	7e-1	At3g44250	CYP71B38	O.I.	H.G.	S.X.	Please select
0.36	50.8	0.97	GmaAffx.73402.1.S1_at	BI972164	-	-	9e-2	At1g44760	universal stress protein (USP) family protein	O.I.	H.G.	S.X.	Please select
0.35	48.6	0.98	GmaAffx.70509.1.A1_at	CD400633	-	-	2e-1	At1g50640	ERF3 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 3)	O.I.	H.G.	S.X.	Please select
0.31	42.2	0.99	GmaAffx.76966.1.S1_at	CA853106	transcription factor bZIP58	-	9e-21	At3g58120	BZIP61	O.I.	H.G.	S.X.	Please select
0.29	39.0	0.97	GmaAffx.81178.1.S1_at	BE807325	-	-	9e-1	At1g26796	-	O.I.	H.G.	S.X.	Please select
0.28	39.0	0.97	GmaAffx.21062.1.A1_at	BE820248	-	-	8e-1	At1g07570	APK1A	O.I.	H.G.	S.X.	Please select
0.28	39.0	0.99	GmaAffx.69216.1.S1_at	BM527668	-	-	1e+0	At4g19620	unknown protein	O.I.	H.G.	S.X.	Please select
0.26	33.9	0.98	GmaAffx.86327.1.S1_at	AW307012	-	-	3e+0	At5g57230	-	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
33.4	99.9	GSM308556	Mature Soybean (Glycine max) pollen grains replicate 1	GSE12286	Genomic Expression Profiling of Mature Soybean (Glycine max) Pollen
31.0	99.9	GSM308559	Mature Soybean (Glycine max) pollen grains Replicate 2	GSE12286	Genomic Expression Profiling of Mature Soybean (Glycine max) Pollen
29.4	99.8	GSM308560	Mature Soybean (Glycine max) pollen grains Replicate 3	GSE12286	Genomic Expression Profiling of Mature Soybean (Glycine max) Pollen

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

Back to the CoP portal site

Back to the KAGIANA project homepage