Co-expression analysis

Gene ID	GmaAffx.88475.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At4g24550: clathrin adaptor complexes medium subunit family protein (HF=3e-42)
Module size	25 genes
NF	0.47
%ile	78.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.71	87.8	0.98	GmaAffx.88475.1.S1_at	BM887264	-	-	3e-42	At4g24550	clathrin adaptor complexes medium subunit family protein	O.I.	H.G.	S.X.	Please select
0.68	86.4	0.99	GmaAffx.90621.1.S1_s_at	CF806346	-	-	4e-50	At2g21270	ubiquitin fusion degradation UFD1 family protein	O.I.	H.G.	S.X.	Please select
0.62	82.1	0.98	GmaAffx.68425.1.S1_at	BI425905	-	-	1e-35	At3g57650	LPAT2	O.I.	H.G.	S.X.	Please select
0.60	80.7	0.98	GmaAffx.56889.1.S1_s_at	AW781023	-	-	3e-7	At3g59380	FTA (FARNESYLTRANSFERASE A)	O.I.	H.G.	S.X.	Please select
0.58	78.8	0.99	Gma.7528.2.S1_at	BM891312	-	-	3e-49	At4g16143	IMPA-2 (IMPORTIN ALPHA ISOFORM 2)	O.I.	H.G.	S.X.	Please select
0.57	78.8	0.98	GmaAffx.75484.1.S1_at	AW472180	-	-	7e-5	At1g17370	UBP1B (oligouridylate binding protein 1B)	O.I.	H.G.	S.X.	Please select
0.56	78.2	0.99	GmaAffx.29121.1.S1_at	BU762958	-	-	1e+0	At4g17310	unknown protein	O.I.	H.G.	S.X.	Please select
0.55	76.3	0.98	GmaAffx.70158.1.S1_at	AI437590	-	-	1e-19	At2g01270	AtQSOX2 (quiescin-sulfhydryl oxidase 2)	O.I.	H.G.	S.X.	Please select
0.54	74.8	0.99	Gma.16282.4.S1_a_at	AW234404	-	-	1e-20	At1g43190	polypyrimidine tract-binding protein, putative / heterogeneous nuclear ribonucleoprotein, putative	O.I.	H.G.	S.X.	Please select
0.53	74.2	0.98	GmaAffx.83007.1.S1_at	BQ252622	-	-	7e-17	At3g02540	RAD23-3 (PUTATIVE DNA REPAIR PROTEIN RAD23-3)	O.I.	H.G.	S.X.	Please select
0.48	67.7	0.98	GmaAffx.55210.1.S1_at	BE804778	-	-	5e-1	At1g08650	PPCK1 (PHOSPHOENOLPYRUVATE CARBOXYLASE KINASE)	O.I.	H.G.	S.X.	Please select
0.47	66.6	0.98	GmaAffx.43069.1.S1_at	AI494747	-	-	4e-7	At1g14570	UBX domain-containing protein	O.I.	H.G.	S.X.	Please select
0.46	65.5	0.99	GmaAffx.68394.1.S1_at	BU082577	-	-	3e+0	At5g03660	unknown protein	O.I.	H.G.	S.X.	Please select
0.45	63.9	0.98	Gma.5989.2.S1_a_at	BU965260	-	-	2e-23	At2g17390	AKR2B (ANKYRIN REPEAT-CONTAINING 2B)	O.I.	H.G.	S.X.	Please select
0.43	60.6	0.98	GmaAffx.76206.1.S1_at	BE059995	-	-	5e-59	At1g71820	SEC6	O.I.	H.G.	S.X.	Please select
0.42	59.3	0.98	Gma.6579.2.S1_at	AW233874	-	-	2e-8	At5g28220	binding	O.I.	H.G.	S.X.	Please select
0.41	58.1	0.99	GmaAffx.92886.1.S1_s_at	CF808611	-	-	3e-41	At5g09900	EMB2107 (EMBRYO DEFECTIVE 2107)	O.I.	H.G.	S.X.	Please select
0.40	57.1	0.99	GmaAffx.91113.1.S1_s_at	CF806834	-	-	1e-31	At4g23460	beta-adaptin, putative	O.I.	H.G.	S.X.	Please select
0.39	54.5	0.98	GmaAffx.78964.1.S1_at	AW201648	-	-	1e-3	At3g52660	RNA recognition motif (RRM)-containing protein	O.I.	H.G.	S.X.	Please select
0.39	54.5	0.98	GmaAffx.90994.1.S1_s_at	CF806719	-	-	7e-12	At4g11410	short-chain dehydrogenase/reductase (SDR) family protein	O.I.	H.G.	S.X.	Please select
0.37	51.7	0.98	GmaAffx.92182.1.S1_s_at	CF807907	-	-	9e-1	At1g69800	CBS domain-containing protein	O.I.	H.G.	S.X.	Please select
0.36	50.8	0.99	GmaAffx.82721.1.S1_at	AW757398	-	-	6e-67	At3g05530	RPT5A (REGULATORY PARTICLE TRIPLE-A ATPASE 5A)	O.I.	H.G.	S.X.	Please select
0.34	47.2	0.98	Gma.5672.9.S1_at	AW781478	-	-	2e-102	At1g54270	EIF4A-2	O.I.	H.G.	S.X.	Please select
0.28	39.0	0.98	Gma.5135.2.S1_at	BU925878	-	-	2e-42	At5g08500	transmembrane CLPTM1 family protein	O.I.	H.G.	S.X.	Please select
0.24	30.9	0.98	Gma.6104.2.S1_a_at	BI320811	-	-	3e-20	At5g63260	zinc finger (CCCH-type) family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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