Co-expression analysis

Gene ID	GmaAffx.88272.2.S1_at
Gene name
Homology with Arabidopsis	Similar to At5g45430: protein kinase, putative (HF=1e-19)
Module size	6 genes
NF	0.47
%ile	78.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.56	78.2	0.97	GmaAffx.88272.2.S1_at	BG156388	-	-	1e-19	At5g45430	protein kinase, putative	O.I.	H.G.	S.X.	Please select
0.67	86.1	0.97	GmaAffx.66139.1.S1_at	BM143113	-	-	4e-4	At2g26830	emb1187 (embryo defective 1187)	O.I.	H.G.	S.X.	Please select
0.55	76.3	0.97	Gma.3406.3.S1_at	AI794714	-	-	1e-12	At3g60800	zinc finger (DHHC type) family protein	O.I.	H.G.	S.X.	Please select
0.50	71.7	0.98	GmaAffx.37857.1.S1_at	BF008702	-	-	4e-3	At1g34780	ATAPRL4 (APR-like 4)	O.I.	H.G.	S.X.	Please select
0.32	43.7	0.97	Gma.5750.3.S1_x_at	BG652524	-	-	1e-29	At4g17890	AGD8 (ARF-GAP DOMAIN 8)	O.I.	H.G.	S.X.	Please select
0.26	33.9	0.97	Gma.15666.2.S1_at	CA936840	-	-	3e-22	At4g32140	-	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
19.8	99.7	GSM308556	Mature Soybean (Glycine max) pollen grains replicate 1	GSE12286	Genomic Expression Profiling of Mature Soybean (Glycine max) Pollen
15.4	99.6	GSM308560	Mature Soybean (Glycine max) pollen grains Replicate 3	GSE12286	Genomic Expression Profiling of Mature Soybean (Glycine max) Pollen
15.0	99.6	GSM308559	Mature Soybean (Glycine max) pollen grains Replicate 2	GSE12286	Genomic Expression Profiling of Mature Soybean (Glycine max) Pollen

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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