Co-expression analysis

Gene ID	GmaAffx.87924.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At3g05000: transport protein particle (TRAPP) component Bet3 family protein (HF=9e-39)
Module size	6 genes
NF	0.56
%ile	87.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.6	0.99	GmaAffx.87924.1.S1_at	AW596893	-	-	9e-39	At3g05000	transport protein particle (TRAPP) component Bet3 family protein	O.I.	H.G.	S.X.	Please select
0.50	71.7	0.99	Gma.17905.2.S1_at	CD393233	-	-	8e-37	At4g01320	ATSTE24	O.I.	H.G.	S.X.	Please select
0.46	65.5	0.99	Gma.3820.3.S1_a_at	BI968156	-	-	3e-3	At1g30230	elongation factor 1-beta / EF-1-beta	O.I.	H.G.	S.X.	Please select
0.44	63.3	0.99	GmaAffx.56409.1.S1_at	BU965321	-	-	1e-16	At1g08750	GPI-anchor transamidase, putative	O.I.	H.G.	S.X.	Please select
0.44	63.3	0.99	Gma.3084.2.S1_a_at	BU081126	-	-	1e+0	At2g24395	chaperone protein dnaJ-related	O.I.	H.G.	S.X.	Please select
0.42	59.3	0.99	Gma.2892.1.S1_at	CD398484	-	-	3e-36	At1g29150	ATS9 (ARABIDOPSIS NON-ATPASE SUBUNIT 9)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.1	97.3	GSM258499	Soybean shoot apical meristem, 4 short-day treatment	GSE10251	Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
4.0	97.2	GSM258502	Vegetative shoot apical meristem, replicate B	GSE10251	Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
3.6	96.7	GSM267287	Axillary meristem from 10-day-old soybean seedlings	GSE10607	Genome-wide analysis of gene expression in the soybean shoot apical meristem
3.6	96.7	GSM237068	Soy_shoot apical meristem	GSE10607	Genome-wide analysis of gene expression in the soybean shoot apical meristem
3.6	96.7	GSM258496	Vegetative soybean shoot apical meristem	GSE10251	Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
3.5	96.6	GSM267288	Axillary meristem from 10-day-old soybean seedlings repliacte 2	GSE10607	Genome-wide analysis of gene expression in the soybean shoot apical meristem
3.3	96.2	GSM258504	Soybean shoot apical meristem, 4 short-day replicate B	GSE10251	Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
3.2	96.0	GSM258501	Soybean shoot apical meristem, 1 short-day treatment replicate B	GSE10251	Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
3.1	95.8	GSM258498	Soybean shoot apical meristem, 2 short-day treatment	GSE10251	Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
3.1	95.8	GSM258497	Soybean Shoot Apical Meristem, 1 short-day treatment	GSE10251	Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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