Co-expression analysis

Gene ID GmaAffx.87561.1.S1_x_at
Gene name
Homology with ArabidopsisSimilar to At1g26250: proline-rich extensin, putative (HF=4e-3)
Module size 6 genes
NF 0.85
%ile 99.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6786.10.91GmaAffx.87561.1.S1_x_atBQ473189--4e-3At1g26250proline-rich extensin, putativeO.I.H.G.S.X.
0.9198.60.90GmaAffx.34785.11.S1_x_atBG042061--6e-3At1g21310ATEXT3 (EXTENSIN 3)O.I.H.G.S.X.
0.8392.50.83Gma.5584.7.S1_x_atAI988428--6e-5At1g21310ATEXT3 (EXTENSIN 3)O.I.H.G.S.X.
0.8392.50.88GmaAffx.34785.11.S1_atBG042061--6e-3At1g21310ATEXT3 (EXTENSIN 3)O.I.H.G.S.X.
0.8091.50.89GmaAffx.90800.1.S1_x_atCF806525--2e-2At5g06630proline-rich extensin-like family proteinO.I.H.G.S.X.
0.6080.70.90GmaAffx.90749.1.S1_x_atCF806474--3e-4At2g43150proline-rich extensin-like family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
29.799.8GSM29292395_1465.1L.R283L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
10.799.4GSM29291689_C203.1L.SLL1U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
7.198.8GSM29290579_C211.1L.SLL3U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
6.298.6GSM29290175_1457.1L.R279U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
5.598.3GSM29291083_1471.1L.R286L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
5.498.2GSM29291285_1467.1L.R284L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
5.398.2GSM29291890_1489.1L.R295U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
5.298.1GSM29291588_1481.1L.R291U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
4.998.0GSM29290478_1453.1L.R277U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
4.998.0GSM29292092_1474.1L.R287P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
4.897.9GSM29291386_1447.1L.R273L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
4.797.8GSM29290881_1454.1L.R277P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
4.597.7GSM29290377_C199.1L.V7L1L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
4.197.3GSM29291487_1471.1L.R286U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.997.1GSM29290982_1447.1L.R273U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.897.0GSM29290780_1483.1L.R292L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.696.7GSM29291184_1446.1L.R272P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.296.0GSM24480717_CON.M2W3.CEL, Experimental replicate 3GSE9687Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistanceLink to GEO
3.195.8GSM29291991_C205.1L.SLL2L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage