Co-expression analysis

Gene ID	GmaAffx.87561.1.S1_x_at
Gene name
Homology with Arabidopsis	Similar to At1g26250: proline-rich extensin, putative (HF=4e-3)
Module size	6 genes
NF	0.85
%ile	99.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	86.1	0.91	GmaAffx.87561.1.S1_x_at	BQ473189	-	-	4e-3	At1g26250	proline-rich extensin, putative	O.I.	H.G.	S.X.	Please select
0.91	98.6	0.90	GmaAffx.34785.11.S1_x_at	BG042061	-	-	6e-3	At1g21310	ATEXT3 (EXTENSIN 3)	O.I.	H.G.	S.X.	Please select
0.83	92.5	0.83	Gma.5584.7.S1_x_at	AI988428	-	-	6e-5	At1g21310	ATEXT3 (EXTENSIN 3)	O.I.	H.G.	S.X.	Please select
0.83	92.5	0.88	GmaAffx.34785.11.S1_at	BG042061	-	-	6e-3	At1g21310	ATEXT3 (EXTENSIN 3)	O.I.	H.G.	S.X.	Please select
0.80	91.5	0.89	GmaAffx.90800.1.S1_x_at	CF806525	-	-	2e-2	At5g06630	proline-rich extensin-like family protein	O.I.	H.G.	S.X.	Please select
0.60	80.7	0.90	GmaAffx.90749.1.S1_x_at	CF806474	-	-	3e-4	At2g43150	proline-rich extensin-like family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
29.7	99.8	GSM292923	95_1465.1L.R283L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
10.7	99.4	GSM292916	89_C203.1L.SLL1U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
7.1	98.8	GSM292905	79_C211.1L.SLL3U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
6.2	98.6	GSM292901	75_1457.1L.R279U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.5	98.3	GSM292910	83_1471.1L.R286L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.4	98.2	GSM292912	85_1467.1L.R284L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.3	98.2	GSM292918	90_1489.1L.R295U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.2	98.1	GSM292915	88_1481.1L.R291U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.9	98.0	GSM292904	78_1453.1L.R277U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.9	98.0	GSM292920	92_1474.1L.R287P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.8	97.9	GSM292913	86_1447.1L.R273L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.7	97.8	GSM292908	81_1454.1L.R277P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.5	97.7	GSM292903	77_C199.1L.V7L1L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.1	97.3	GSM292914	87_1471.1L.R286U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.9	97.1	GSM292909	82_1447.1L.R273U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.8	97.0	GSM292907	80_1483.1L.R292L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.6	96.7	GSM292911	84_1446.1L.R272P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.2	96.0	GSM244807	17_CON.M2W3.CEL, Experimental replicate 3	GSE9687	Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
3.1	95.8	GSM292919	91_C205.1L.SLL2L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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