Co-expression analysis

Gene ID GmaAffx.87526.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g63470: NF-YC4 (NUCLEAR FACTOR Y, SUBUNIT C4) (HF=6e+0)
Module size 7 genes
NF 0.49
%ile 79.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6786.10.96GmaAffx.87526.1.S1_atBM954581--6e+0At5g63470NF-YC4 (NUCLEAR FACTOR Y, SUBUNIT C4)O.I.H.G.S.X.
0.4665.50.96GmaAffx.59154.1.S1_atBG508624--7e+0At4g37685unknown proteinO.I.H.G.S.X.
0.4665.50.97GmaAffx.91355.1.S1_s_atCF807080alternative oxidase 2b-7e-5At5g64210AOX2O.I.H.G.S.X.
0.4463.30.98GmaAffx.86361.1.S1_s_atBG508205alternative oxidase 2b-4e-9At3g27620AOX1CO.I.H.G.S.X.
0.4463.30.98Gma.11120.1.S1_atU87907.1alternative oxidase 2b-3e-6At3g22370AOX1A (ALTERNATIVE OXIDASE 1A)O.I.H.G.S.X.
0.4057.10.96GmaAffx.78968.2.S1_atBM188587--9e-13At5g39670calcium-binding EF hand family proteinO.I.H.G.S.X.
0.3243.70.96GmaAffx.91573.1.S1_atCF807298--5e-9At3g05200ATL6O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.796.8GSM209598resistant_48hours_rep3GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO

Inter-species module comparison

A co-expression module including the maize gene, Zm.16973.1.S1_at, orthologous to the query gene, GmaAffx.87526.1.S1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.9499.5Zm.16973.1.S1_atAt5g63470VQ motif family protein-1e-8At3g22160VQ motif-containing proteinO.I.H.G.S.X.
0.4352.8Zm.19063.1.S1_atAt5g63470hypothetical protein LOC100274479-2e-1At5g58140PHOT2 (PHOTOTROPIN 2)O.I.H.G.S.X.
0.4048.5Zm.2168.1.A1_atAt5g63470--2e+0At3g46940deoxyuridine 5'-triphosphate nucleotidohydrolase familyO.I.H.G.S.X.
0.3742.3Zm.17309.1.A1_s_atAt5g63470t-snare-4e+0At5g64680unknown proteinO.I.H.G.S.X.
0.3437.2Zm.12532.1.A1_atAt5g63470--1e+0At4g12850far-red impaired responsive family protein / FAR1 family proteinO.I.H.G.S.X.
0.3437.2Zm.9080.1.A1_atAt5g63470--2e-2At3g55280RPL23AB (RIBOSOMAL PROTEIN L23AB)O.I.H.G.S.X.
0.3336.0Zm.17254.1.A1_atAt5g63470--2e-3At2g39050hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.
0.3233.4Zm.12272.1.A1_atAt5g63470--3e+0At4g16240unknown proteinO.I.H.G.S.X.
0.3233.4Zm.6564.1.A1_atAt5g63470hypothetical protein LOC100272535-2e+0At4g34850chalcone and stilbene synthase family proteinO.I.H.G.S.X.
0.3029.8Zm.17737.1.S1_atAt5g63470--6e-3At5g28560unknown proteinO.I.H.G.S.X.
0.2828.1Zm.4527.1.A1_s_atAt5g63470hypothetical protein LOC100272791-1e+0At5g16390CAC1 (CHLOROPLASTIC ACETYLCOENZYME A CARBOXYLASE 1)O.I.H.G.S.X.
0.2828.1Zm.10100.1.A1_atAt5g63470hypothetical protein LOC100277526-5e-6At1g50900-O.I.H.G.S.X.
0.2828.1Zm.16824.3.S1_atAt5g63470SAM domain family protein-3e-1At3g07170sterile alpha motif (SAM) domain-containing proteinO.I.H.G.S.X.
0.2724.6Zm.6045.2.A1_a_atAt5g63470guanine nucleotide-binding protein beta subunit-like protein-2e-10At1g18080ATARCAO.I.H.G.S.X.
0.2622.7Zm.3742.1.A1_atAt5g63470--2e-1At3g47510unknown proteinO.I.H.G.S.X.
0.2622.7Zm.14951.1.A1_atAt5g63470cell wall protein (put.); putative-5e-3At2g30370allergen-relatedO.I.H.G.S.X.
0.2622.7Zm.4359.1.A1_atAt5g63470EMB2756-1e-14At1g34550EMB2756 (EMBRYO DEFECTIVE 2756)O.I.H.G.S.X.
0.2622.7Zm.18528.1.A1_atAt5g63470--3e+0At2g14095unknown proteinO.I.H.G.S.X.
0.2521.3Zm.5837.1.S1_atAt5g63470photosystem II reaction center W protein-6e+0At5g66710protein kinase, putativeO.I.H.G.S.X.
0.2521.3ZmAffx.811.1.S1_atAt5g63470--3e+0At2g31305INH3 (INHIBITOR-3)O.I.H.G.S.X.
0.2419.8Zm.4201.1.A1_atAt5g63470hypothetical protein LOC100274325-2e+0At3g21215RNA-binding protein, putativeO.I.H.G.S.X.
0.2318.6Zm.5558.1.A1_atAt5g63470--3e-1At3g20100CYP705A19O.I.H.G.S.X.
0.2318.6Zm.6688.1.A1_atAt5g63470hypothetical protein LOC100275476-3e+0At1g68862unknown proteinO.I.H.G.S.X.
0.2318.6Zm.1912.1.A1_atAt5g63470hypothetical protein LOC100274020-4e-1At4g10170synaptobrevin-related family proteinO.I.H.G.S.X.
0.2216.9Zm.2253.1.A1_atAt5g63470hypothetical protein LOC100216849-8e-14At2g22120protein binding / zinc ion bindingO.I.H.G.S.X.
0.2014.2Zm.6904.1.S1_atAt5g63470hypothetical protein LOC100273500-6e-24At5g37020ARF8 (AUXIN RESPONSE FACTOR 8)O.I.H.G.S.X.
0.1912.8Zm.16102.1.A1_atAt5g63470--8e-9At5g48530unknown proteinO.I.H.G.S.X.
0.1710.6Zm.7881.1.A1_a_atAt5g63470--3e-3At4g24590unknown proteinO.I.H.G.S.X.
0.169.4Zm.561.1.A1_atAt5g63470glutathione transferase23-5e-1At3g43800ATGSTU27 (GLUTATHIONE S-TRANSFERASE TAU 27)O.I.H.G.S.X.
0.158.6Zm.12309.1.S1_atAt5g63470ABA-induced protein-5e-1At5g29560calcium ion bindingO.I.H.G.S.X.
0.147.7Zm.3080.1.A1_atAt5g63470IAA13 - auxin-responsive Aux/IAA family member-3e-15At3g23050IAA7 (INDOLE-3-ACETIC ACID 7)O.I.H.G.S.X.
0.147.7Zm.3885.1.S1_atAt5g63470Pectin methylesterase1-6e-2At3g06830pectinesterase family proteinO.I.H.G.S.X.
0.136.8Zm.6432.1.A1_atAt5g63470hypothetical protein LOC100191156-7e-10At5g64200ATSC35O.I.H.G.S.X.
0.125.9Zm.3289.1.A1_atAt5g63470--2e+0At3g16240DELTA-TIPO.I.H.G.S.X.
0.104.6Zm.14995.1.A1_atAt5g63470--2e+0At1g62960ACS10 (ACC SYNTHASE 10)O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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