Co-expression analysis

Gene ID	GmaAffx.87379.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At5g49160: MET1 (METHYLTRANSFERASE 1) (HF=9e-51)
Module size	6 genes
NF	0.66
%ile	93.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	86.1	0.96	GmaAffx.87379.1.S1_at	BI699241	-	-	9e-51	At5g49160	MET1 (METHYLTRANSFERASE 1)	O.I.	H.G.	S.X.	Please select
0.83	92.5	0.96	GmaAffx.72251.1.S1_at	BF070887	-	-	1e+0	At5g14000	anac084 (Arabidopsis NAC domain containing protein 84)	O.I.	H.G.	S.X.	Please select
0.67	86.1	0.96	GmaAffx.459.1.S1_s_at	BE823057	-	-	8e-2	At5g17690	TFL2 (TERMINAL FLOWER 2)	O.I.	H.G.	S.X.	Please select
0.67	86.1	0.96	GmaAffx.85846.1.S1_at	BU547392	-	-	2e-1	At5g46640	DNA-binding family protein	O.I.	H.G.	S.X.	Please select
0.61	81.8	0.96	GmaAffx.63772.1.S1_at	AW471580	-	-	4e-9	At5g17690	TFL2 (TERMINAL FLOWER 2)	O.I.	H.G.	S.X.	Please select
0.38	53.3	0.95	GmaAffx.46567.1.S1_at	AI440556	-	-	2e-17	At5g41880	POLA3	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
14.1	99.6	GSM258499	Soybean shoot apical meristem, 4 short-day treatment	GSE10251	Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
13.2	99.5	GSM258496	Vegetative soybean shoot apical meristem	GSE10251	Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
12.8	99.5	GSM267287	Axillary meristem from 10-day-old soybean seedlings	GSE10607	Genome-wide analysis of gene expression in the soybean shoot apical meristem
12.4	99.5	GSM258504	Soybean shoot apical meristem, 4 short-day replicate B	GSE10251	Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
11.2	99.4	GSM258502	Vegetative shoot apical meristem, replicate B	GSE10251	Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
11.0	99.4	GSM258497	Soybean Shoot Apical Meristem, 1 short-day treatment	GSE10251	Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
10.9	99.4	GSM258498	Soybean shoot apical meristem, 2 short-day treatment	GSE10251	Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
10.8	99.4	GSM258500	Soybean shoot apical meristem, 6 short-day treatment	GSE10251	Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
10.7	99.4	GSM258501	Soybean shoot apical meristem, 1 short-day treatment replicate B	GSE10251	Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
10.7	99.4	GSM237068	Soy_shoot apical meristem	GSE10607	Genome-wide analysis of gene expression in the soybean shoot apical meristem
10.2	99.3	GSM237069	Soy_shoot apical meristem2	GSE10607	Genome-wide analysis of gene expression in the soybean shoot apical meristem
10.1	99.3	GSM267288	Axillary meristem from 10-day-old soybean seedlings repliacte 2	GSE10607	Genome-wide analysis of gene expression in the soybean shoot apical meristem
8.8	99.1	GSM258503	Soybean shoot apical meristem, 2 short-day replicate B	GSE10251	Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
7.6	98.9	GSM258505	Soybean shoot apical meristem, 6 short-day replicate B	GSE10251	Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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