Co-expression analysis

Gene ID	GmaAffx.86728.3.S1_s_at
Gene name
Homology with Arabidopsis	Similar to At1g32540: LOL1 (LSD ONE LIKE 1) (HF=7e-5)
Module size	6 genes
NF	0.71
%ile	95.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.80	91.5	0.98	GmaAffx.86728.3.S1_s_at	BG239619	-	-	7e-5	At1g32540	LOL1 (LSD ONE LIKE 1)	O.I.	H.G.	S.X.	Please select
0.91	98.6	0.98	GmaAffx.86728.1.S1_at	BI967919	-	-	3e-7	At4g20380	zinc finger protein (LSD1)	O.I.	H.G.	S.X.	Please select
0.80	91.5	0.98	Gma.1413.1.S1_a_at	AW734487	-	-	8e-37	At1g15880	GOS11 (golgi snare 11)	O.I.	H.G.	S.X.	Please select
0.60	80.7	0.98	GmaAffx.91290.1.S1_s_at	CF806951	hypothetical LOC547651	-	2e-2	At5g25360	unknown protein	O.I.	H.G.	S.X.	Please select
0.53	74.2	0.97	Gma.3852.1.S1_at	CD399104	-	-	8e-75	At5g27840	TOPP8	O.I.	H.G.	S.X.	Please select
0.50	71.7	0.98	Gma.10215.1.S1_a_at	AY263347.1	protein kinase Pti1	-	1e-73	At3g59350	serine/threonine protein kinase, putative	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
30.0	99.8	GSM308560	Mature Soybean (Glycine max) pollen grains Replicate 3	GSE12286	Genomic Expression Profiling of Mature Soybean (Glycine max) Pollen
28.8	99.8	GSM308559	Mature Soybean (Glycine max) pollen grains Replicate 2	GSE12286	Genomic Expression Profiling of Mature Soybean (Glycine max) Pollen
26.0	99.8	GSM308556	Mature Soybean (Glycine max) pollen grains replicate 1	GSE12286	Genomic Expression Profiling of Mature Soybean (Glycine max) Pollen

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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