Co-expression analysis

Gene ID	GmaAffx.86724.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At3g03570: - (HF=1e-33)
Module size	7 genes
NF	0.50
%ile	81.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.57	78.8	0.98	GmaAffx.86724.1.S1_at	BI468815	-	-	1e-33	At3g03570	-	O.I.	H.G.	S.X.	Please select
0.67	86.1	0.98	GmaAffx.40419.1.S1_at	BF325410	-	-	1e-11	At3g03570	-	O.I.	H.G.	S.X.	Please select
0.50	71.7	0.98	GmaAffx.57700.1.S1_at	AW781821	-	-	8e-20	At1g75850	VPS35B (VPS35 HOMOLOG B)	O.I.	H.G.	S.X.	Please select
0.44	63.3	0.98	Gma.4305.3.S1_a_at	BG044173	-	-	5e-8	At5g57940	ATCNGC5 (CYCLIC NUCLEOTIDE GATED CHANNEL 5)	O.I.	H.G.	S.X.	Please select
0.43	60.6	0.98	GmaAffx.91473.1.S1_at	CF807198	-	-	3e-22	At4g28860	ckl4 (Casein Kinase I-like 4)	O.I.	H.G.	S.X.	Please select
0.40	57.1	0.98	GmaAffx.7255.1.S1_at	BE657500	-	-	3e-8	At4g37460	SRFR1 (SUPPRESSOR OF RPS4-RLD 1)	O.I.	H.G.	S.X.	Please select
0.27	35.7	0.98	GmaAffx.42058.1.S1_at	AW507617	-	-	3e-13	At1g61040	VIP5 (vernalization independence 5)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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