Co-expression analysis

Gene ID GmaAffx.86503.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g13890: unknown protein (HF=3e+0)
Module size 6 genes
NF 0.32
%ile 59.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.60.97GmaAffx.86503.1.S1_atBG157670--3e+0At5g13890unknown proteinO.I.H.G.S.X.
0.4259.30.98GmaAffx.86724.1.S1_atBI468815--1e-33At3g03570-O.I.H.G.S.X.
0.3650.80.98GmaAffx.40419.1.S1_atBF325410--1e-11At3g03570-O.I.H.G.S.X.
0.2939.00.98GmaAffx.76624.1.S1_atCA939046--6e-10At4g31580SRZ-22O.I.H.G.S.X.
0.1923.70.98GmaAffx.81052.2.S1_atBM528722--6e-39At3g58500PP2A-3 (PROTEIN PHOSPHATASE 2A-3)O.I.H.G.S.X.
0.1316.30.98Gma.12030.3.S1_a_atBG359479--4e+0At3g47341unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO

Inter-species module comparison

A co-expression module including the poplar gene, PtpAffx.16297.1.A1_at, orthologous to the query gene, GmaAffx.86503.1.S1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.9097.9PtpAffx.16297.1.A1_atAt5g13890--7e-1At5g10620-O.I.H.G.S.X.
0.3964.6PtpAffx.205559.1.S1_atAt5g13890hypothetical protein-2e-47At1g21570zinc finger (CCCH-type) family proteinO.I.H.G.S.X.
0.3559.7PtpAffx.37714.2.A1_a_atAt5g13890hypothetical protein-1e-7At5g01010-O.I.H.G.S.X.
0.3255.2Ptp.2112.1.S1_atAt5g13890hypothetical protein-8e-31At2g22370unknown proteinO.I.H.G.S.X.
0.2850.5PtpAffx.222453.1.S1_atAt5g13890hypothetical protein-8e-1At2g02970nucleoside phosphatase family protein / GDA1/CD39 family proteinO.I.H.G.S.X.
0.2747.1PtpAffx.16432.1.S1_a_atAt5g13890hypothetical protein-3e-8At3g24010ING1 (INHIBITOR OF GROWTH 1)O.I.H.G.S.X.
0.2747.1Ptp.3117.1.A1_s_atAt5g13890hypothetical protein-5e-16At3g21865PEX22 (peroxin 22)O.I.H.G.S.X.
0.2645.2PtpAffx.9921.6.A1_s_atAt5g13890histone ubiquitination proteins group-5e-31At1g14400UBC1 (UBIQUITIN CARRIER PROTEIN 1)O.I.H.G.S.X.
0.2645.2PtpAffx.17258.1.A1_atAt5g13890hypothetical protein-7e-10At3g52350D111/G-patch domain-containing proteinO.I.H.G.S.X.
0.2340.5PtpAffx.5311.1.S1_atAt5g13890hypothetical protein-7e-31At2g18600RUB1-conjugating enzyme, putativeO.I.H.G.S.X.
0.2340.5PtpAffx.134328.1.A1_atAt5g13890hypothetical protein-6e+0At5g28410unknown proteinO.I.H.G.S.X.
0.2238.3PtpAffx.114834.1.A1_atAt5g13890hypothetical protein-6e+0At5g11740AGP15 (ARABINOGALACTAN PROTEIN 15)O.I.H.G.S.X.
0.2034.6PtpAffx.146350.1.A1_s_atAt5g13890hypothetical protein-2e-3At3g26360unknown proteinO.I.H.G.S.X.
0.2034.6PtpAffx.5850.1.A1_x_atAt5g13890hypothetical protein-1e+0At1g56060unknown proteinO.I.H.G.S.X.
0.2034.6Ptp.1187.1.A1_s_atAt5g13890hypothetical protein-2e-15At5g43130TAF4 (TBP-ASSOCIATED FACTOR 4)O.I.H.G.S.X.
0.1932.7PtpAffx.225687.1.S1_atAt5g13890hypothetical protein-0At5g66760SDH1-1O.I.H.G.S.X.
0.1830.8PtpAffx.9156.2.S1_atAt5g13890hypothetical protein-1e-1At3g23130SUP (SUPERMAN)O.I.H.G.S.X.
0.1626.9PtpAffx.112817.1.A1_atAt5g13890SET domain protein-3e-4At5g43990SUVR2O.I.H.G.S.X.
0.1626.9Ptp.5471.1.S1_s_atAt5g13890hypothetical protein-7e-34At3g16640TCTP (TRANSLATIONALLY CONTROLLED TUMOR PROTEIN)O.I.H.G.S.X.
0.1525.3PtpAffx.140962.1.A1_atAt5g13890--1e+0At5g28750thylakoid assembly protein, putativeO.I.H.G.S.X.
0.1423.5PtpAffx.51977.1.S1_atAt5g13890--3e-33At1g77180chromatin protein familyO.I.H.G.S.X.
0.1321.6PtpAffx.203185.1.S1_atAt5g13890hypothetical protein-2e-51At4g02570ATCUL1 (ARABIDOPSIS THALIANA CULLIN 1)O.I.H.G.S.X.
0.1219.6PtpAffx.99961.1.A1_atAt5g13890hypothetical protein-8e-5At1g49950DNA-binding protein, putativeO.I.H.G.S.X.
0.1016.3Ptp.1492.1.S1_s_atAt5g13890hypothetical protein-4e-33At3g16640TCTP (TRANSLATIONALLY CONTROLLED TUMOR PROTEIN)O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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