Co-expression analysis

Gene ID	GmaAffx.86360.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At5g26280: meprin and TRAF homology domain-containing protein / MATH domain-containing protein (HF=1e+0)
Module size	13 genes
NF	0.40
%ile	70.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.71	87.8	0.93	GmaAffx.86360.1.S1_at	BG508005	-	-	1e+0	At5g26280	meprin and TRAF homology domain-containing protein / MATH domain-containing protein	O.I.	H.G.	S.X.	Please select
0.60	80.7	0.95	Gma.11750.1.S1_at	AW184809	-	-	9e-1	At1g80555	3-isopropylmalate dehydrogenase/ oxidoreductase, acting on the CH-OH group of donors, NAD or NADP as acceptor	O.I.	H.G.	S.X.	Please select
0.54	74.8	0.94	Gma.11750.2.S1_at	BM085051	-	-	1e-2	At1g32690	unknown protein	O.I.	H.G.	S.X.	Please select
0.50	71.7	0.96	Gma.4609.1.S1_at	BI968390	-	-	2e-7	At1g73540	atnudt21 (Arabidopsis thaliana Nudix hydrolase homolog 21)	O.I.	H.G.	S.X.	Please select
0.42	59.3	0.95	Gma.4551.1.S1_at	AW394473	-	-	2e+0	At4g16140	proline-rich family protein	O.I.	H.G.	S.X.	Please select
0.42	59.3	0.96	GmaAffx.20155.1.S1_at	CA819552	-	-	2e+0	At2g18740	small nuclear ribonucleoprotein E, putative / snRNP-E, putative / Sm protein E, putative	O.I.	H.G.	S.X.	Please select
0.40	57.1	0.96	GmaAffx.46892.1.S1_s_at	BE020227	-	-	2e-1	At3g07440	unknown protein	O.I.	H.G.	S.X.	Please select
0.39	54.5	0.96	GmaAffx.45180.1.S1_at	BU548301	-	-	1e-6	At5g59550	zinc finger (C3HC4-type RING finger) family protein	O.I.	H.G.	S.X.	Please select
0.36	50.8	0.94	GmaAffx.65758.1.S1_at	BU763547	-	-	1e-4	At5g66200	ARO2 (ARMADILLO REPEAT ONLY 2)	O.I.	H.G.	S.X.	Please select
0.34	47.2	0.95	Gma.3828.1.S1_at	BE657673	-	-	2e+0	At1g30260	-	O.I.	H.G.	S.X.	Please select
0.32	43.7	0.96	Gma.404.1.A1_at	AW348243	-	-	8e-1	At1g37140	MCT1 (mei2 C-Terminal RRM only like 1)	O.I.	H.G.	S.X.	Please select
0.32	43.7	0.96	GmaAffx.93108.1.S1_s_at	CF808027	-	-	3e-16	At5g22250	CCR4-NOT transcription complex protein, putative	O.I.	H.G.	S.X.	Please select
0.20	25.1	0.95	Gma.16575.2.S1_s_at	BM891412	-	-	2e-2	At1g51200	zinc finger (AN1-like) family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.9	98.0	GSM292481	79_1257.1G.R164L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.5	97.7	GSM292458	58_1257.1G.R164U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.5	97.7	GSM292273	18_1177.1E.R109U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.4	97.6	GSM292318	66_1177.1E.R109L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.2	97.4	GSM292469	68_1280.1G.R178P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.2	97.4	GSM292422	25_1253.1G.R161U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.1	97.3	GSM292246	60_1047.1B.R027L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.1	97.3	GSM292459	59_1282.1G.R179P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.0	97.2	GSM292433	35_1253.1G.R161L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.8	97.0	GSM292249	63_1047.1B.R027U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.8	97.0	GSM292425	28_1271.1G.R173U_rerun, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.8	97.0	GSM292462	61_1271.1G.R173L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.5	96.6	GSM292417	20_1276.1G.R175P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.5	96.6	GSM292238	45_1051.1B.R029L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.5	96.6	GSM292455	55_C112.1G.R9G1P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.4	96.4	GSM292461	60_C123.1G.V7G3L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.4	96.4	GSM292467	66_C109.1G.V7G1U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.4	96.4	GSM292334	80_1172.1E.R106P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.3	96.2	GSM292257	76_C032.1B.V7B3P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.3	96.2	GSM292485	82_1258.1G.R164P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.3	96.2	GSM292210	72-C002.1A.V7A1P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.2	96.0	GSM292447	48_1247.1G.R154L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.2	96.0	GSM292268	13_1181.1E.R111U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.2	96.0	GSM292409	13_1247.1G.R154U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.2	96.0	GSM292464	63_C123.1G.V7G3U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.2	96.0	GSM292208	70_C004.1A.R9A1P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.2	96.0	GSM292343	10_C091.1F.V7F1L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.2	96.0	GSM292443	44_1275.1G.R175U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.2	96.0	GSM292479	77_1248.1G.R154P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.1	95.8	GSM292492	9_1272.1G.R173P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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