CoP: Co-expressed Biological Processes

Co-expression analysis

Gene ID GmaAffx.84862.1.S1_at

Gene name
Homology with Arabidopsis Similar to At5g61240: protein binding (HF=1e-29)

Module size 8 genes

NF 0.33

%ile 60.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func. Ev AGI code Arabidopsis gene name O.I. H.G. S.X. Other DB
0.71 87.8 0.98 GmaAffx.84862.1.S1_at AI965964 - - 1e-29 At5g61240 protein binding O.I. H.G. S.X.
0.48 67.7 0.99 GmaAffx.93138.1.S1_s_at CF808863 - - 2e-27 At2g32080 PUR ALPHA-1 O.I. H.G. S.X.
0.40 57.1 0.98 GmaAffx.22627.1.S1_at BG352722 - - 4e-2 At1g18520 TET11 (TETRASPANIN11) O.I. H.G. S.X.
0.37 51.7 0.98 Gma.5244.3.S1_a_at BM893397 - - 1e-32 At2g32080 PUR ALPHA-1 O.I. H.G. S.X.
0.36 50.8 0.98 GmaAffx.37006.2.S1_at AI494839 - - 2e-11 At4g20410 GSNAP (GAMMA-SOLUBLE NSF ATTACHMENT PROTEIN) O.I. H.G. S.X.
0.33 46.1 0.98 GmaAffx.91636.1.S1_s_at CF807361 - - 3e-63 At1g57870 ATSK42 (ARABIDOPSIS SHAGGY-LIKE KINASE 42) O.I. H.G. S.X.
0.25 32.6 0.98 GmaAffx.1729.2.S1_at BG726769 - - 2e-42 At4g35410 clathrin adaptor complex small chain family protein O.I. H.G. S.X.
0.16 19.7 0.98 GmaAffx.90062.1.S1_s_at CF805787 - - 1e-108 At1g53750 RPT1A (REGULATORY PARTICLE TRIPLE-A 1A) O.I. H.G. S.X.

Click More genes

Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO

Inter-species module comparison

A co-expression module including the Arabidopsis gene, At5g61240, orthologous to the query gene, GmaAffx.84862.1.S1_at

VF %ile Gene ID Repr. ID Gene Name Func. O.I. H.G. S.X. Other DB
0.46 59.8 At5g61240 836245 protein binding F:protein binding;P:signal transduction;C:Golgi apparatus;PMBOFA O.I. H.G. S.X.
0.67 81.6 At5g36290 833627 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system, membrane;BMOPFA O.I. H.G. S.X.
0.60 75.7 At5g05820 830467 phosphate translocator-related F:organic anion transmembrane transporter activity;P:unknown;C:unknown;PMFOBA O.I. H.G. S.X.
0.58 73.8 At4g12650 826878 - F:unknown;P:unknown;C:integral to membrane, Golgi apparatus, plasma membrane, vacuole;MPOF O.I. H.G. S.X.
0.53 68.6 At1g14670 838029 endomembrane protein 70, putative F:unknown;P:transport;C:integral to membrane, Golgi apparatus, membrane;MPOF O.I. H.G. S.X.
0.53 68.6 At2g36300 818202 integral membrane Yip1 family protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;MFOP O.I. H.G. S.X.
0.46 59.8 At5g35160 833470 - F:unknown;P:unknown;C:integral to membrane, Golgi apparatus;MPOF O.I. H.G. S.X.
0.41 52.4 At1g64650 842773 - F:unknown;P:unknown;C:plasma membrane;BPMOFA O.I. H.G. S.X.
0.39 48.4 At2g34250 817986 protein transport protein sec61, putative F:P-P-bond-hydrolysis-driven protein transmembrane transporter activity;P:response to salt stress, protein secretion;C:membrane;BOMAFP O.I. H.G. S.X.
0.36 43.6 At3g05280 819692 integral membrane Yip1 family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFP O.I. H.G. S.X.
0.32 35.7 At5g18520 831970 - F:unknown;P:unknown;C:endomembrane system, integral to membrane;MPOFB O.I. H.G. S.X.

Select a plant to compare co-expressed genes between species.
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays

Back to the CoP portal site

Back to the KAGIANA project homepage