Co-expression analysis

Gene ID	GmaAffx.84803.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At5g16070: chaperonin, putative (HF=2e-60)
Module size	6 genes
NF	0.33
%ile	60.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.59	79.5	0.97	GmaAffx.84803.1.S1_at	BU761560	-	-	2e-60	At5g16070	chaperonin, putative	O.I.	H.G.	S.X.	Please select
0.67	86.1	0.98	Gma.3183.3.S1_at	BU964617	-	-	3e-16	At3g20050	ATTCP-1	O.I.	H.G.	S.X.	Please select
0.55	76.3	0.98	GmaAffx.53249.1.S1_at	AW756517	-	-	8e-35	At3g11830	chaperonin, putative	O.I.	H.G.	S.X.	Please select
0.36	50.8	0.97	GmaAffx.64720.1.S1_at	BU964510	-	-	2e-20	At1g24510	T-complex protein 1 epsilon subunit, putative / TCP-1-epsilon, putative / chaperonin, putative	O.I.	H.G.	S.X.	Please select
0.21	26.6	0.97	Gma.2229.2.S1_at	BM886154	-	-	1e-9	At4g21150	HAP6 (HAPLESS 6)	O.I.	H.G.	S.X.	Please select
0.14	17.5	0.97	Gma.10357.2.S1_at	CA783137	-	-	4e-34	At3g03960	chaperonin, putative	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.1	97.3	GSM309530	storage protein suppression expt, RNAi biol rep2, tech rep1	GSE12314	Storage Protein Suppression in Transgenic Soybean Cotyledons
4.0	97.2	GSM309557	storage protein suppression expt, RNAi biol rep1, tech rep2	GSE12314	Storage Protein Suppression in Transgenic Soybean Cotyledons
3.9	97.1	GSM309531	storage protein suppression expt, RNAi biol rep2, tech rep2	GSE12314	Storage Protein Suppression in Transgenic Soybean Cotyledons
3.8	97.0	GSM309529	storage protein suppression expt, RNAi biol rep1, tech rep1	GSE12314	Storage Protein Suppression in Transgenic Soybean Cotyledons
3.8	97.0	GSM258499	Soybean shoot apical meristem, 4 short-day treatment	GSE10251	Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
3.5	96.6	GSM244898	38_CON.M1W4.CEL, Experimental replicate 4	GSE9687	Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
3.4	96.4	GSM293601	31_2069.2B.R213L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.4	96.4	GSM244779	10_SLO.M1W4.CEL, Experimental replicate 4	GSE9687	Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
3.4	96.4	GSM258496	Vegetative soybean shoot apical meristem	GSE10251	Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
3.3	96.2	GSM244833	22_VP9.M1W1.CEL, Experimental replicate 1	GSE9687	Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
3.2	96.0	GSM244919	5_CON.M1W1.CEL, Experimental replicate 1	GSE9687	Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
3.1	95.8	GSM293566	79_2005.2A.R146L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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