Co-expression analysis

Gene ID GmaAffx.8472.3.S1_at
Gene name
Homology with ArabidopsisSimilar to At3g01300: protein kinase, putative (HF=2e-26)
Module size 9 genes
NF 0.46
%ile 76.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9499.20.98GmaAffx.8472.3.S1_atBQ742250--2e-26At3g01300protein kinase, putativeO.I.H.G.S.X.
0.5374.20.99Gma.16282.4.S1_a_atAW234404--1e-20At1g43190polypyrimidine tract-binding protein, putative / heterogeneous nuclear ribonucleoprotein, putativeO.I.H.G.S.X.
0.4867.70.98GmaAffx.71007.1.S1_atBM187697--4e-35At1g08190vacuolar assembly protein, putative (VPS41)O.I.H.G.S.X.
0.4259.30.98GmaAffx.84527.2.S1_atBE023131--2e-17At2g26140ftsh4 (FtsH protease 4)O.I.H.G.S.X.
0.4057.10.99GmaAffx.82721.1.S1_atAW757398--6e-67At3g05530RPT5A (REGULATORY PARTICLE TRIPLE-A ATPASE 5A)O.I.H.G.S.X.
0.3346.10.99Gma.7498.3.S1_atCA800433--4e-71At3g25800PP2AA2 (PROTEIN PHOSPHATASE 2A SUBUNIT A2)O.I.H.G.S.X.
0.3346.10.99Gma.7498.2.S1_atBE608631--3e-7At1g25490RCN1 (ROOTS CURL IN NPA)O.I.H.G.S.X.
0.3142.20.99GmaAffx.43069.1.S1_atAI494747--4e-7At1g14570UBX domain-containing proteinO.I.H.G.S.X.
0.3142.20.99GmaAffx.68394.1.S1_atBU082577--3e+0At5g03660unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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