Co-expression analysis

Gene ID GmaAffx.8472.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At3g01300: protein kinase, putative (HF=2e-40)
Module size 6 genes
NF 0.21
%ile 44.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5778.80.98GmaAffx.8472.1.S1_atAW350979--2e-40At3g01300protein kinase, putativeO.I.H.G.S.X.
0.3346.10.98Gma.2465.1.S1_atCD390577--2e+0At2g32890RALFL17 (RALF-LIKE 17)O.I.H.G.S.X.
0.2228.10.98Gma.7498.1.S1_atAW309233--2e-65At3g25800PP2AA2 (PROTEIN PHOSPHATASE 2A SUBUNIT A2)O.I.H.G.S.X.
0.2126.60.98Gma.8259.1.S1_atBU549783--2e-48At1g47550unknown proteinO.I.H.G.S.X.
0.1518.70.98GmaAffx.78115.1.S1_atBU544826--1e-7At4g00830RNA recognition motif (RRM)-containing proteinO.I.H.G.S.X.
0.1316.30.98GmaAffx.44143.1.S1_atBU547730--2e-16At1g02080transcriptional regulator-relatedO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.195.8GSM184829Whole Seed at the globular stage, biological replicate 2GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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