Co-expression analysis

Gene ID	GmaAffx.84404.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At4g07670: protease-associated (PA) domain-containing protein (HF=4e-6)
Module size	6 genes
NF	0.02
%ile	9.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.6	0.92	GmaAffx.84404.1.S1_at	BG238613	-	-	4e-6	At4g07670	protease-associated (PA) domain-containing protein	O.I.	H.G.	S.X.	Please select
0.44	63.3	0.94	GmaAffx.48644.1.S1_at	AW620338	-	-	9e-13	At5g19740	peptidase M28 family protein	O.I.	H.G.	S.X.	Please select
0.06	9.0	0.97	Gma.6514.2.S1_a_at	BI786323	-	-	2e-7	At3g02830	ZFN1 (ZINC FINGER PROTEIN 1)	O.I.	H.G.	S.X.	Please select
0.02	4.5	0.97	GmaAffx.67417.1.S1_at	BE191495	-	-	4e-1	At3g14610	CYP72A7	O.I.	H.G.	S.X.	Please select
0.02	4.5	0.96	GmaAffx.84199.1.S1_at	AW201276	-	-	3e-22	At5g51970	sorbitol dehydrogenase, putative / L-iditol 2-dehydrogenase, putative	O.I.	H.G.	S.X.	Please select
-	1.4	0.96	GmaAffx.80018.1.S1_at	BF071726	-	-	1e-22	At3g02510	regulator of chromosome condensation (RCC1) family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO

Inter-species module comparison

A co-expression module including the wheat gene, Ta.9132.3.S1_s_at, orthologous to the query gene, GmaAffx.84404.1.S1_at

VF	%ile	Gene ID	Repr. ID	Gene Name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.50	72.4	Ta.9132.3.S1_s_at	At4g07670	-	-	7e-1	At5g19740	peptidase M28 family protein	O.I.	H.G.	S.X.	Please select
0.60	81.0	Ta.18704.1.S1_x_at	At4g07670	-	-	3e-5	At5g53300	UBC10 (ubiquitin-conjugating enzyme 10)	O.I.	H.G.	S.X.	Please select
0.46	66.8	Ta.5139.1.S1_at	At4g07670	-	-	2e-1	At5g19740	peptidase M28 family protein	O.I.	H.G.	S.X.	Please select
0.44	64.5	Ta.16216.1.S1_s_at	At4g07670	-	-	4e+0	At3g51260	PAD1 (20s proteasome alpha subunit pad1)	O.I.	H.G.	S.X.	Please select
0.43	62.2	Ta.18704.1.S1_at	At4g07670	-	-	3e-5	At5g53300	UBC10 (ubiquitin-conjugating enzyme 10)	O.I.	H.G.	S.X.	Please select
0.27	35.6	Ta.30706.1.S1_at	At4g07670	expansin EXPA6	-	8e+0	At2g03090	ATEXPA15 (ARABIDOPSIS THALIANA EXPANSIN A15)	O.I.	H.G.	S.X.	Please select

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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