Co-expression analysis

Gene ID	GmaAffx.84404.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At4g07670: protease-associated (PA) domain-containing protein (HF=4e-6)
Module size	6 genes
NF	0.02
%ile	9.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.6	0.92	GmaAffx.84404.1.S1_at	BG238613	-	-	4e-6	At4g07670	protease-associated (PA) domain-containing protein	O.I.	H.G.	S.X.	Please select
0.44	63.3	0.94	GmaAffx.48644.1.S1_at	AW620338	-	-	9e-13	At5g19740	peptidase M28 family protein	O.I.	H.G.	S.X.	Please select
0.06	9.0	0.97	Gma.6514.2.S1_a_at	BI786323	-	-	2e-7	At3g02830	ZFN1 (ZINC FINGER PROTEIN 1)	O.I.	H.G.	S.X.	Please select
0.02	4.5	0.97	GmaAffx.67417.1.S1_at	BE191495	-	-	4e-1	At3g14610	CYP72A7	O.I.	H.G.	S.X.	Please select
0.02	4.5	0.96	GmaAffx.84199.1.S1_at	AW201276	-	-	3e-22	At5g51970	sorbitol dehydrogenase, putative / L-iditol 2-dehydrogenase, putative	O.I.	H.G.	S.X.	Please select
-	1.4	0.96	GmaAffx.80018.1.S1_at	BF071726	-	-	1e-22	At3g02510	regulator of chromosome condensation (RCC1) family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO

Inter-species module comparison

A co-expression module including the poplar gene, PtpAffx.34440.1.S1_at, orthologous to the query gene, GmaAffx.84404.1.S1_at

VF	%ile	Gene ID	Repr. ID	Gene Name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	99.2	PtpAffx.34440.1.S1_at	At4g07670	hypothetical protein	-	6e-16	At4g19540	INDL (IND1(IRON-SULFUR PROTEIN REQUIRED FOR NADH DEHYDROGENASE)-LIKE)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.67	91.1	Ptp.5040.1.S1_at	At4g07670	hypothetical protein	-	1e-34	At5g48870	SAD1 (SUPERSENSITIVE TO ABA AND DROUGHT 1)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.44	71.9	Ptp.1051.2.A1_a_at	At4g07670	-	-	2e-1	At5g60590	yrdC protein-related	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.44	71.9	PtpAffx.112661.1.A1_at	At4g07670	hypothetical protein	-	5e+0	At2g44470	BGLU29 (BETA GLUCOSIDASE 29)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.38	63.7	Ptp.2307.2.S1_at	At4g07670	hypothetical protein	-	2e-6	At3g06330	zinc finger (C3HC4-type RING finger) family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.27	47.1	PtpAffx.105178.1.S1_at	At4g07670	-	-	2e-12	At3g01790	ribosomal protein L13 family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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