Co-expression analysis

Gene ID	GmaAffx.84404.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At4g07670: protease-associated (PA) domain-containing protein (HF=4e-6)
Module size	6 genes
NF	0.02
%ile	9.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.6	0.92	GmaAffx.84404.1.S1_at	BG238613	-	-	4e-6	At4g07670	protease-associated (PA) domain-containing protein	O.I.	H.G.	S.X.	Please select
0.44	63.3	0.94	GmaAffx.48644.1.S1_at	AW620338	-	-	9e-13	At5g19740	peptidase M28 family protein	O.I.	H.G.	S.X.	Please select
0.06	9.0	0.97	Gma.6514.2.S1_a_at	BI786323	-	-	2e-7	At3g02830	ZFN1 (ZINC FINGER PROTEIN 1)	O.I.	H.G.	S.X.	Please select
0.02	4.5	0.97	GmaAffx.67417.1.S1_at	BE191495	-	-	4e-1	At3g14610	CYP72A7	O.I.	H.G.	S.X.	Please select
0.02	4.5	0.96	GmaAffx.84199.1.S1_at	AW201276	-	-	3e-22	At5g51970	sorbitol dehydrogenase, putative / L-iditol 2-dehydrogenase, putative	O.I.	H.G.	S.X.	Please select
-	1.4	0.96	GmaAffx.80018.1.S1_at	BF071726	-	-	1e-22	At3g02510	regulator of chromosome condensation (RCC1) family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO

Inter-species module comparison

A co-expression module including the barley gene, Contig10185_at, orthologous to the query gene, GmaAffx.84404.1.S1_at

VF	%ile	Gene ID	Repr. ID	Gene Name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.1	Contig10185_at	At4g07670	-	-	8e-1	At3g54720	AMP1 (ALTERED MERISTEM PROGRAM 1)	O.I.	H.G.	S.X.	Please select
0.50	66.9	Contig10315_at	At4g07670	-	-	1e+0	At4g24015	zinc finger (RING-H2 type) protein-related	O.I.	H.G.	S.X.	Please select
0.35	45.1	Contig15006_at	At4g07670	-	-	5e+0	At5g38800	AtbZIP43 (Arabidopsis thaliana basic leucine-zipper 43)	O.I.	H.G.	S.X.	Please select
0.33	42.6	Contig14081_at	At4g07670	-	-	1e-1	At1g22340	AtUGT85A7 (UDP-glucosyl transferase 85A7)	O.I.	H.G.	S.X.	Please select
0.24	27.2	Contig8406_at	At4g07670	-	-	4e-2	At3g10040	transcription factor	O.I.	H.G.	S.X.	Please select
0.16	15.3	Contig12720_at	At4g07670	-	-	7e+0	At5g38180	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	O.I.	H.G.	S.X.	Please select

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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