Co-expression analysis

Gene ID	GmaAffx.83672.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At2g26000: zinc finger (C3HC4-type RING finger) family protein (HF=2e-51)
Module size	6 genes
NF	0.69
%ile	94.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.6	0.98	GmaAffx.83672.1.S1_at	BU926827	-	-	2e-51	At2g26000	zinc finger (C3HC4-type RING finger) family protein	O.I.	H.G.	S.X.	Please select
0.83	92.5	0.98	Gma.15087.2.S1_at	CA800369	-	-	1e-94	At4g28860	ckl4 (Casein Kinase I-like 4)	O.I.	H.G.	S.X.	Please select
0.67	86.1	0.98	GmaAffx.78631.1.S1_at	BQ613160	-	-	5e-31	At1g12360	KEU (keule)	O.I.	H.G.	S.X.	Please select
0.67	86.1	0.98	GmaAffx.67700.1.S1_at	CB063625	-	-	9e-1	At5g13620	unknown protein	O.I.	H.G.	S.X.	Please select
0.48	67.7	0.98	GmaAffx.90745.1.S1_s_at	CF806470	-	-	4e+0	At5g42235	Expressed protein	O.I.	H.G.	S.X.	Please select
0.36	50.8	0.99	Gma.15087.1.S1_at	BI968833	-	-	5e+0	At1g01530	AGL28 (AGAMOUS-LIKE 28)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.3	96.2	GSM293911	5_2236.2E.R249P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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