Co-expression analysis

Gene ID GmaAffx.83384.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g18860: inosine-uridine preferring nucleoside hydrolase family protein (HF=4e-10)
Module size 36 genes
NF 0.32
%ile 58.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9799.80.88GmaAffx.83384.1.S1_atBG508000--4e-10At5g18860inosine-uridine preferring nucleoside hydrolase family proteinO.I.H.G.S.X.
0.6382.90.89GmaAffx.49224.1.S1_atBE608990--3e-1At5g62780DNAJ heat shock N-terminal domain-containing proteinO.I.H.G.S.X.
0.6080.70.90Gma.6888.1.S1_atBM178801--1e-3At5g18890inosine-uridine preferring nucleoside hydrolase family proteinO.I.H.G.S.X.
0.5273.10.93GmaAffx.14734.1.A1_atBQ079911--7e-9At1g02475-O.I.H.G.S.X.
0.4665.50.89GmaAffx.23295.1.S1_atBI968028--3e-1At5g52960unknown proteinO.I.H.G.S.X.
0.4158.10.95Gma.1205.2.S1_a_atBU081316--5e-32At2g04842EMB2761 (EMBRYO DEFECTIVE 2761)O.I.H.G.S.X.
0.3954.50.95Gma.613.1.S1_a_atBI424045--2e-1At1g73890protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinO.I.H.G.S.X.
0.3954.50.93Gma.1650.2.S1_atAW830667--8e-28At2g20890PSB29O.I.H.G.S.X.
0.3751.70.93GmaAffx.76841.1.S1_atBM270378--5e-3At2g46910plastid-lipid associated protein PAP / fibrillin family proteinO.I.H.G.S.X.
0.3650.80.93GmaAffx.2197.1.S1_atCD414544--1e+0At5g10680calmodulin-binding protein-relatedO.I.H.G.S.X.
0.3650.80.94Gma.16691.1.S1_atCD418097--5e-27At1g11870SRS (SERYL-TRNA SYNTHETASE)O.I.H.G.S.X.
0.3346.10.94Gma.15790.1.S1_atCD401713--5e-6At5g13410immunophilin / FKBP-type peptidyl-prolyl cis-trans isomerase family proteinO.I.H.G.S.X.
0.3243.70.92Gma.2574.1.S1_a_atBI469532--3e-38At1g10760SEX1 (STARCH EXCESS 1)O.I.H.G.S.X.
0.3243.70.95Gma.1205.2.S1_atBU081316--5e-32At2g04842EMB2761 (EMBRYO DEFECTIVE 2761)O.I.H.G.S.X.
0.3243.70.94GmaAffx.91729.1.S1_s_atCF807454ferredoxin-dependent glutamate synthase-2e-39At5g04140GLU1 (GLUTAMATE SYNTHASE 1)O.I.H.G.S.X.
0.3243.70.94Gma.1781.2.S1_atBE802569--3e-44At5g14260SET domain-containing proteinO.I.H.G.S.X.
0.3142.20.93Gma.10592.4.S1_atBE805844--3e-3At5g42310pentatricopeptide (PPR) repeat-containing proteinO.I.H.G.S.X.
0.3142.20.88Gma.6062.1.S1_atBU551189--4e-7At3g23300dehydration-responsive protein-relatedO.I.H.G.S.X.
0.3040.40.92GmaAffx.84643.1.S1_atBU545213--1e-19At5g61580PFK4 (PHOSPHOFRUCTOKINASE 4)O.I.H.G.S.X.
0.3040.40.95GmaAffx.33373.1.A1_atBU544165--5e+0At3g06040ribosomal protein L12 family proteinO.I.H.G.S.X.
0.2939.00.93GmaAffx.93032.1.S1_s_atCF808757ferredoxin-dependent glutamate synthase-2e-51At2g41220GLU2 (GLUTAMATE SYNTHASE 2)O.I.H.G.S.X.
0.2939.00.94GmaAffx.92196.1.S1_s_atCF807500--5e-37At5g13120peptidyl-prolyl cis-trans isomerase cyclophilin-type family proteinO.I.H.G.S.X.
0.2839.00.94GmaAffx.69339.3.S1_atBQ272709--1e-3At2g36990SIGF (RNA POLYMERASE SIGMA-SUBUNIT F)O.I.H.G.S.X.
0.2839.00.95Gma.9121.1.S1_a_atCD403401--2e-34At1g12410CLP2 (CLP PROTEASE PROTEOLYTIC SUBUNIT 2)O.I.H.G.S.X.
0.2839.00.94Gma.15866.1.A1_atCD418056--4e-38At1g22700tetratricopeptide repeat (TPR)-containing proteinO.I.H.G.S.X.
0.2839.00.94GmaAffx.58791.1.S1_atBF596983--4e+0At3g08490unknown proteinO.I.H.G.S.X.
0.2735.70.92Gma.12322.1.S1_atCA851243ndhK protein-7e-139Atcg00430-O.I.H.G.S.X.
0.2735.70.93Gma.10078.2.S1_x_atBU546501--1e-1At3g26900shikimate kinase family proteinO.I.H.G.S.X.
0.2633.90.95GmaAffx.88399.1.S1_atCA819362--2e-49At1g08520CHLDO.I.H.G.S.X.
0.2633.90.92Gma.2574.1.S1_atBI469532--3e-38At1g10760SEX1 (STARCH EXCESS 1)O.I.H.G.S.X.
0.2430.90.93Gma.1212.1.S1_atBU090976--3e+0At5g55110stigma-specific Stig1 family proteinO.I.H.G.S.X.
0.2126.60.92Gma.2159.1.S1_atBI970548--3e-34At5g49030OVA2 (ovule abortion 2)O.I.H.G.S.X.
0.2025.10.92Gma.10341.1.S1_a_atCD416556--4e-17At3g10060immunophilin, putative / FKBP-type peptidyl-prolyl cis-trans isomerase, putativeO.I.H.G.S.X.
0.1721.20.94GmaAffx.76960.1.S1_atBU577570--1e-33At3g47860apolipoprotein D-relatedO.I.H.G.S.X.
0.1518.70.94GmaAffx.1301.26.S1_atCD397615--4e-16At3g53130LUT1 (LUTEIN DEFICIENT 1)O.I.H.G.S.X.
0.1316.30.93Gma.7276.1.S1_atCD394605--2e-31At1g45230defective chloroplasts and leaves protein-related / DCL protein-relatedO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
10.399.3GSM245938Leaf_LCO treated_Rep 3_48 h After TreatmentGSE9730Effect of foliar spray of lipo-chitooligosaccharide (Nod factor) on soybean leaf gene expression.Link to GEO
9.999.3GSM245937Leaf_LCO treated_Rep 2_48 h After TreatmentGSE9730Effect of foliar spray of lipo-chitooligosaccharide (Nod factor) on soybean leaf gene expression.Link to GEO
9.399.2GSM245936Leaf_LCO treated_Rep 1_48 h After TreatmentGSE9730Effect of foliar spray of lipo-chitooligosaccharide (Nod factor) on soybean leaf gene expression.Link to GEO
9.299.2GSM245935Leaf_Water Control_Rep 3_48 h After TreatmentGSE9730Effect of foliar spray of lipo-chitooligosaccharide (Nod factor) on soybean leaf gene expression.Link to GEO
8.899.1GSM245934Leaf_Water Control_Rep 2_48 h After TreatmentGSE9730Effect of foliar spray of lipo-chitooligosaccharide (Nod factor) on soybean leaf gene expression.Link to GEO
8.699.1GSM245933Leaf_Water Control_Rep 1_48 h After TreatmentGSE9730Effect of foliar spray of lipo-chitooligosaccharide (Nod factor) on soybean leaf gene expression.Link to GEO
8.299.0GSM238050Soybean-Mandarin-6-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
8.099.0GSM238051Soybean-Mandarin-7-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
7.899.0GSM238048Soybean-Mandarin-3-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
7.298.9GSM238049Soybean-Mandarin-4-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
7.198.8GSM238047Soybean-Mandarin-1-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
6.898.7GSM238061Soybean-S03W4-5-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
6.898.7GSM238041Soybean-Bayfield-4-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
6.698.7GSM238030Soybean-2601R-2-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
6.698.7GSM209590susceptible_48hours_rep2GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO
6.698.7GSM238056Soybean-PS46R-5-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
6.698.7GSM238054Soybean-PS46R-3-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
6.598.7GSM238043Soybean-Bayfield-5-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
6.598.7GSM238060Soybean-S03W4-4-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
6.598.7GSM238036Soybean-Bayfield-1-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
6.498.6GSM209581susceptible_48hours_rep1GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO
6.398.6GSM238034Soybean-2601R-6-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
6.298.6GSM238058Soybean-S03W4-2-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
6.198.5GSM238033Soybean-2601R-5-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
6.198.5GSM209589resistant_48hours_rep2GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO
6.198.5GSM238038Soybean-Bayfield-2-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
6.198.5GSM209582mock_0hours_rep2GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO
6.098.5GSM238031Soybean-2601R-3-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
5.998.5GSM238032Soybean-2601R-4-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
5.998.5GSM238039Soybean-Bayfield-3-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage