Co-expression analysis

Gene ID	GmaAffx.83206.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At3g26210: CYP71B23 (HF=2e-2)
Module size	6 genes
NF	0.17
%ile	39.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.6	0.95	GmaAffx.83206.1.S1_at	BE610184	-	-	2e-2	At3g26210	CYP71B23	O.I.	H.G.	S.X.	Please select
0.67	86.1	0.93	GmaAffx.83135.1.S1_at	BQ453029	-	-	8e-1	At4g00080	UNE11 (unfertilized embryo sac 11)	O.I.	H.G.	S.X.	Please select
0.18	22.3	0.97	GmaAffx.92678.1.S1_s_at	CF808403	-	-	6e-35	At2g34850	MEE25 (maternal effect embryo arrest 25)	O.I.	H.G.	S.X.	Please select
0.18	22.3	0.97	GmaAffx.93335.1.S1_s_at	CF806304	-	-	7e-52	At3g13920	EIF4A1 (EUKARYOTIC TRANSLATION INITIATION FACTOR 4A1)	O.I.	H.G.	S.X.	Please select
0.10	13.0	0.97	GmaAffx.85706.1.S1_at	BG882274	-	-	3e-30	At2g35020	UTP--glucose-1-phosphate uridylyltransferase family protein	O.I.	H.G.	S.X.	Please select
0.04	7.0	0.96	GmaAffx.88130.1.S1_at	BU082486	-	-	1e-17	At1g04400	CRY2 (CRYPTOCHROME 2)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO

Inter-species module comparison

A co-expression module including the grape gene, 1613920_at, orthologous to the query gene, GmaAffx.83206.1.S1_at

VF	%ile	Gene ID	Repr. ID	Gene Name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.55	77.3	1613920_at	At3g26210	hypothetical protein LOC100260935	-	2e+0	At1g07830	ribosomal protein L29 family protein	O.I.	H.G.	S.X.	Please select
0.60	81.9	1606834_s_at	At3g26210	hypothetical protein LOC100249984	-	7e-5	At2g30160	mitochondrial substrate carrier family protein	O.I.	H.G.	S.X.	Please select
0.50	72.7	1616666_at	At3g26210	hypothetical protein LOC100249984	-	2e-8	At2g30160	mitochondrial substrate carrier family protein	O.I.	H.G.	S.X.	Please select
0.36	50.7	1614841_at	At3g26210	-	-	6e+0	At5g01610	unknown protein	O.I.	H.G.	S.X.	Please select
0.25	30.5	1615187_at	At3g26210	hypothetical protein LOC100253047	-	6e-3	At5g58003	CPL4 (C-TERMINAL DOMAIN PHOSPHATASE-LIKE 4)	O.I.	H.G.	S.X.	Please select
0.16	16.7	1619051_at	At3g26210	hypothetical protein LOC100252679	-	5e-6	At2g03680	SPR1 (SPIRAL1)	O.I.	H.G.	S.X.	Please select

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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