Co-expression analysis

Gene ID GmaAffx.83206.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At3g26210: CYP71B23 (HF=2e-2)
Module size 6 genes
NF 0.17
%ile 39.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.60.95GmaAffx.83206.1.S1_atBE610184--2e-2At3g26210CYP71B23O.I.H.G.S.X.
0.6786.10.93GmaAffx.83135.1.S1_atBQ453029--8e-1At4g00080UNE11 (unfertilized embryo sac 11)O.I.H.G.S.X.
0.1822.30.97GmaAffx.92678.1.S1_s_atCF808403--6e-35At2g34850MEE25 (maternal effect embryo arrest 25)O.I.H.G.S.X.
0.1822.30.97GmaAffx.93335.1.S1_s_atCF806304--7e-52At3g13920EIF4A1 (EUKARYOTIC TRANSLATION INITIATION FACTOR 4A1)O.I.H.G.S.X.
0.1013.00.97GmaAffx.85706.1.S1_atBG882274--3e-30At2g35020UTP--glucose-1-phosphate uridylyltransferase family proteinO.I.H.G.S.X.
0.047.00.96GmaAffx.88130.1.S1_atBU082486--1e-17At1g04400CRY2 (CRYPTOCHROME 2)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO

Inter-species module comparison

A co-expression module including the Arabidopsis gene, At3g26210, orthologous to the query gene, GmaAffx.83206.1.S1_at

VF%ileGene IDRepr. IDGene NameFunc.O.I.H.G.S.X.Other DB
0.157.8At3g26210822222CYP71B23putative cytochrome P450O.I.H.G.S.X.
0.4050.8At5g46050834646PTR3 (PEPTIDE TRANSPORTER 3)Encodes a di- and tri-peptide transporter involved in responses to wounding, virulent bacterial pathogens, and high NaCl concentrations. The protein is predicted to have 12 transmembrane helicies.O.I.H.G.S.X.
0.3338.1At5g38900833882DSBA oxidoreductase family proteinF:protein disulfide oxidoreductase activity;P:biological_process unknown;C:cellular_component unknown;BOFPMAO.I.H.G.S.X.
0.2726.2At1g14870838052-F:molecular_function unknown;P:response to oxidative stress;C:plasma membrane;PMFOO.I.H.G.S.X.
0.1710.2At5g24210832488lipase class 3 family proteinF:triacylglycerol lipase activity;P:lipid metabolic process;C:cellular_component unknown;POO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage