Co-expression analysis

Gene ID	GmaAffx.83135.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At4g00080: UNE11 (unfertilized embryo sac 11) (HF=8e-1)
Module size	11 genes
NF	0.11
%ile	29.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.95	99.4	0.92	GmaAffx.83135.1.S1_at	BQ453029	-	-	8e-1	At4g00080	UNE11 (unfertilized embryo sac 11)	O.I.	H.G.	S.X.	Please select
0.63	82.9	0.95	GmaAffx.83206.1.S1_at	BE610184	-	-	2e-2	At3g26210	CYP71B23	O.I.	H.G.	S.X.	Please select
0.27	35.7	0.96	GmaAffx.70346.1.S1_at	BU964958	-	-	5e+0	At4g01940	NFU1	O.I.	H.G.	S.X.	Please select
0.18	22.3	0.97	GmaAffx.93335.1.S1_s_at	CF806304	-	-	7e-52	At3g13920	EIF4A1 (EUKARYOTIC TRANSLATION INITIATION FACTOR 4A1)	O.I.	H.G.	S.X.	Please select
0.15	18.7	0.97	GmaAffx.92678.1.S1_s_at	CF808403	-	-	6e-35	At2g34850	MEE25 (maternal effect embryo arrest 25)	O.I.	H.G.	S.X.	Please select
0.13	16.3	0.97	GmaAffx.85706.1.S1_at	BG882274	-	-	3e-30	At2g35020	UTP--glucose-1-phosphate uridylyltransferase family protein	O.I.	H.G.	S.X.	Please select
0.11	14.2	0.95	GmaAffx.90541.1.S1_s_at	CF806266	-	-	6e-18	At5g22060	ATJ2	O.I.	H.G.	S.X.	Please select
0.08	11.0	0.97	GmaAffx.88130.1.S1_at	BU082486	-	-	1e-17	At1g04400	CRY2 (CRYPTOCHROME 2)	O.I.	H.G.	S.X.	Please select
0.06	9.0	0.96	Gma.13074.2.S1_a_at	BI972676	-	-	2e-11	At5g18650	zinc finger (C3HC4-type RING finger) family protein	O.I.	H.G.	S.X.	Please select
0.04	7.0	0.97	GmaAffx.21491.1.S1_at	AW832637	-	-	3e+0	At5g49480	ATCP1 (Ca2+-binding protein 1)	O.I.	H.G.	S.X.	Please select
0.04	7.0	0.96	GmaAffx.49918.1.S1_at	BG362868	-	-	3e-22	At4g02670	AtIDD12 (Arabidopsis thaliana Indeterminate(ID)-Domain 12)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO

Inter-species module comparison

A co-expression module including the poplar gene, PtpAffx.148676.1.S1_at, orthologous to the query gene, GmaAffx.83135.1.S1_at

VF	%ile	Gene ID	Repr. ID	Gene Name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	99.2	PtpAffx.148676.1.S1_at	At4g00080	cytochrome P450 /// cytochrome P450 /// cytochrome P450	-	1e-4	At3g26300	CYP71B34	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.67	91.1	PtpAffx.39736.2.A1_a_at	At4g00080	cytochrome P450	-	1e-3	At3g26280	CYP71B4	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.38	63.7	Ptp.4024.2.A1_at	At4g00080	hypothetical protein	-	2e-75	At3g22890	APS1 (ATP SULFURYLASE 1)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.36	61.6	PtpAffx.114927.1.A1_at	At4g00080	-	-	2e-1	At5g38378	-	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.29	50.5	Ptp.6191.1.S1_at	At4g00080	hypothetical protein	-	1e-30	At3g10300	calcium-binding EF hand family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.16	26.9	PtpAffx.2376.1.S1_at	At4g00080	hypothetical protein	-	6e-11	At1g01300	aspartyl protease family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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