Co-expression analysis

Gene ID GmaAffx.82510.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g37820: NIP4 (HF=1e-1)
Module size 6 genes
NF 0.03
%ile 12.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8392.50.97GmaAffx.82510.1.S1_atBG239314--1e-1At5g37820NIP4O.I.H.G.S.X.
0.4360.60.97GmaAffx.91578.1.S1_atCF807303--6e-74At3g54190-O.I.H.G.S.X.
0.1417.50.97Gma.15133.2.S1_a_atBE803230--5e-1At4g13860glycine-rich RNA-binding protein, putativeO.I.H.G.S.X.
0.069.00.97GmaAffx.32617.1.S1_atAW395442--1e-42At1g07360zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing proteinO.I.H.G.S.X.
0.013.40.97Gma.2337.2.S1_a_atAW756331--1e-22At3g13200EMB2769 (EMBRYO DEFECTIVE 2769)O.I.H.G.S.X.
0.013.40.97GmaAffx.27378.1.S1_atBG654320--3e-4At3g16270-O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO

Inter-species module comparison

A co-expression module including the maize gene, Zm.3848.1.S1_at, orthologous to the query gene, GmaAffx.82510.1.S1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.9799.9Zm.3848.1.S1_atAt5g37820hypothetical protein LOC100276006-1e+0At4g13955-O.I.H.G.S.X.
0.4352.8Zm.9252.1.A1_atAt5g37820hypothetical protein LOC100217285-2e+1At4g08290nodulin MtN21 family proteinO.I.H.G.S.X.
0.4149.7Zm.11753.1.A1_atAt5g37820--4e+0At3g18518RTFL20 (ROTUNDIFOLIA LIKE 20)O.I.H.G.S.X.
0.3844.2ZmAffx.877.1.S1_atAt5g37820--8e-1At5g16240acyl-(acyl-carrier-protein) desaturase, putative / stearoyl-ACP desaturase, putativeO.I.H.G.S.X.
0.3742.3Zm.14759.1.S1_atAt5g37820hypothetical protein LOC100191677-4e-2At5g46640DNA-binding family proteinO.I.H.G.S.X.
0.3641.3ZmAffx.567.1.A1_atAt5g37820hypothetical protein LOC100192551-2e-1At5g50760auxin-responsive family proteinO.I.H.G.S.X.
0.3437.2Zm.13345.2.A1_x_atAt5g37820hypothetical protein LOC100279020-2e+0At5g62360invertase/pectin methylesterase inhibitor family proteinO.I.H.G.S.X.
0.3437.2ZmAffx.794.1.A1_atAt5g37820--8e-1At3g21890zinc finger (B-box type) family proteinO.I.H.G.S.X.
0.3336.0Zm.12384.1.A1_atAt5g37820--5e-4At3g23340ckl10 (Casein Kinase I-like 10)O.I.H.G.S.X.
0.3336.0Zm.4744.1.A1_atAt5g37820FHA domain containing protein-5e+0At4g32270unknown proteinO.I.H.G.S.X.
0.3336.0Zm.9079.1.A1_atAt5g37820hypothetical protein LOC100217287-6e-3At1g13890SNAP30 (SOLUBLE N-ETHYLMALEIMIDE-SENSITIVE FACTOR ADAPTOR PROTEIN 30)O.I.H.G.S.X.
0.3131.6Zm.4103.1.A1_atAt5g37820--1e+0At5g13030unknown proteinO.I.H.G.S.X.
0.3131.6Zm.3804.1.S1_atAt5g37820chalcone synthase G-3e-3At4g34850chalcone and stilbene synthase family proteinO.I.H.G.S.X.
0.3131.6ZmAffx.480.1.A1_atAt5g37820transmembrane 9 superfamily protein member 4-8e-1At1g18871unknown proteinO.I.H.G.S.X.
0.3029.8Zm.8086.1.A1_atAt5g37820hypothetical protein LOC100191587-1e+0At4g27435unknown proteinO.I.H.G.S.X.
0.3029.8Zm.5884.1.A1_atAt5g37820hypothetical protein LOC100192097-8e-2At2g35880-O.I.H.G.S.X.
0.2928.1Zm.9886.1.A1_atAt5g37820--1e+0At3g22070proline-rich family proteinO.I.H.G.S.X.
0.2928.1Zm.11660.1.A1_atAt5g37820--2e-9At5g36880acetyl-CoA synthetase, putative / acetate-CoA ligase, putativeO.I.H.G.S.X.
0.2928.1Zm.3523.1.S1_atAt5g37820hypothetical protein LOC100276213-4e-1At1g23060unknown proteinO.I.H.G.S.X.
0.2828.1ZmAffx.886.1.A1_atAt5g37820--8e-1At5g22220-O.I.H.G.S.X.
0.2724.6Zm.18974.1.A1_atAt5g37820hypothetical protein LOC100272472-3e-1At1g17147-O.I.H.G.S.X.
0.2724.6ZmAffx.1427.1.S1_atAt5g37820--5e-170Atcg00190-O.I.H.G.S.X.
0.2622.7Zm.1247.1.S1_atAt5g37820EARLY flowering 4 protein-4e+0At3g17570F-box family proteinO.I.H.G.S.X.
0.2521.3ZmAffx.848.1.A1_atAt5g37820--8e-1At1g22720wall-associated kinase, putativeO.I.H.G.S.X.
0.2521.3ZmAffx.406.9.A1_atAt5g37820--1e+1At5g16580BGLU2 (BETA GLUCOSIDASE 2)O.I.H.G.S.X.
0.2521.3Zm.12522.1.A1_atAt5g37820hypothetical protein LOC100279636-6e-1At5g53190nodulin MtN3 family proteinO.I.H.G.S.X.
0.2419.8ZmAffx.208.1.S1_atAt5g37820--6e-1At5g15460MUB2 (MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 2)O.I.H.G.S.X.
0.2318.6Zm.3124.1.S1_atAt5g37820CONSTANS interacting protein 4-1e+1At5g37770TCH2 (TOUCH 2)O.I.H.G.S.X.
0.2318.6Zm.2040.1.S1_atAt5g37820hypothetical protein LOC100194284-3e-3At3g15355UBC25 (UBIQUITIN-CONJUGATING ENZYME 25)O.I.H.G.S.X.
0.2318.6ZmAffx.758.1.S1_atAt5g37820--3e-3At4g22260IM (IMMUTANS)O.I.H.G.S.X.
0.2318.6ZmAffx.732.1.S1_atAt5g37820--5e+0At3g16640TCTP (TRANSLATIONALLY CONTROLLED TUMOR PROTEIN)O.I.H.G.S.X.
0.2216.9Zm.11882.2.A1_x_atAt5g37820hypothetical protein LOC100191811-1e+0At5g51010rubredoxin family proteinO.I.H.G.S.X.
0.2216.9ZmAffx.139.1.A1_atAt5g37820--1e+1At2g24200cytosol aminopeptidaseO.I.H.G.S.X.
0.2115.5Zm.3849.1.S1_atAt5g37820glutamate decarboxylase-3e-21At3g17760GAD5 (glutamate decarboxylase 5)O.I.H.G.S.X.
0.2115.5Zm.13646.1.A1_atAt5g37820--3e-2At3g10290phosphate translocator-relatedO.I.H.G.S.X.
0.2014.2Zm.15222.1.A1_a_atAt5g37820--4e+0At2g38750ANNAT4 (ANNEXIN ARABIDOPSIS 4)O.I.H.G.S.X.
0.2014.2Zm.19283.1.A1_atAt5g37820hypothetical protein LOC100191797-5e+0At4g29033-O.I.H.G.S.X.
0.1912.8Zm.155.1.A1_a_atAt5g37820brittle endosperm1-4e-3At4g32400SHS1 (SODIUM HYPERSENSITIVE 1)O.I.H.G.S.X.
0.1811.6Zm.1094.1.A1_atAt5g37820--2e-5At5g26210AL4 (ALFIN-LIKE 4)O.I.H.G.S.X.
0.169.4ZmAffx.124.1.S1_atAt5g37820--1e+1At5g42070unknown proteinO.I.H.G.S.X.
0.169.4Zm.13740.1.A1_atAt5g37820--2e-16At2g29140APUM3 (Arabidopsis Pumilio 3)O.I.H.G.S.X.
0.169.4Zm.15242.1.A1_atAt5g37820--1e+1At3g16712unknown proteinO.I.H.G.S.X.
0.169.4ZmAffx.1206.1.S1_atAt5g37820--2e+0At2g3337060S ribosomal protein L23 (RPL23B)O.I.H.G.S.X.
0.158.6Zm.3169.5.S1_a_atAt5g37820hypothetical protein LOC100279753 /// minichromosome maintenance protein-1e-1At5g44635minichromosome maintenance family protein / MCM family proteinO.I.H.G.S.X.
0.147.7Zm.3054.1.S1_atAt5g37820electron transfer flavoprotein beta-subunit-9e-6At5g43430ETFBETAO.I.H.G.S.X.
0.136.8Zm.13728.1.S1_atAt5g37820alpha-expansin 4-2e-19At3g55500ATEXPA16 (ARABIDOPSIS THALIANA EXPANSIN A16)O.I.H.G.S.X.
0.125.9ZmAffx.889.1.S1_atAt5g37820pre-mRNA processing factor-8e-7At2g40650pre-mRNA splicing factor PRP38 family proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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