Co-expression analysis

Gene ID	GmaAffx.82510.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At5g37820: NIP4 (HF=1e-1)
Module size	6 genes
NF	0.03
%ile	12.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.83	92.5	0.97	GmaAffx.82510.1.S1_at	BG239314	-	-	1e-1	At5g37820	NIP4	O.I.	H.G.	S.X.	Please select
0.43	60.6	0.97	GmaAffx.91578.1.S1_at	CF807303	-	-	6e-74	At3g54190	-	O.I.	H.G.	S.X.	Please select
0.14	17.5	0.97	Gma.15133.2.S1_a_at	BE803230	-	-	5e-1	At4g13860	glycine-rich RNA-binding protein, putative	O.I.	H.G.	S.X.	Please select
0.06	9.0	0.97	GmaAffx.32617.1.S1_at	AW395442	-	-	1e-42	At1g07360	zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein	O.I.	H.G.	S.X.	Please select
0.01	3.4	0.97	Gma.2337.2.S1_a_at	AW756331	-	-	1e-22	At3g13200	EMB2769 (EMBRYO DEFECTIVE 2769)	O.I.	H.G.	S.X.	Please select
0.01	3.4	0.97	GmaAffx.27378.1.S1_at	BG654320	-	-	3e-4	At3g16270	-	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO

Inter-species module comparison

A co-expression module including the poplar gene, Ptp.7810.1.S1_at, orthologous to the query gene, GmaAffx.82510.1.S1_at

VF	%ile	Gene ID	Repr. ID	Gene Name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.63	88.1	Ptp.7810.1.S1_at	At5g37820	-	-	4e+0	At4g17980	anac071 (Arabidopsis NAC domain containing protein 71)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.47	74.6	PtpAffx.214322.1.S1_at	At5g37820	hypothetical protein	-	2e+0	At5g41340	UBC4 (UBIQUITIN CONJUGATING ENZYME 4)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.32	55.2	Ptp.4921.1.S1_at	At5g37820	hypothetical protein	-	3e-1	At4g00530	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.22	38.3	PtpAffx.213372.1.S1_at	At5g37820	hypothetical protein	-	3e+0	At5g15690	-	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.18	30.8	Ptp.3171.1.S1_s_at	At5g37820	hypothetical protein	-	3e-7	At3g62880	ATOEP16-4	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.17	29.1	PtpAffx.9643.1.S1_at	At5g37820	hypothetical protein	-	3e-2	At1g25330	basic helix-loop-helix (bHLH) family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.11	18.1	PtpAffx.144148.1.S1_s_at	At5g37820	hypothetical protein	-	1e-38	At2g47970	NPL4 family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.07	11.6	PtpAffx.106353.1.A1_at	At5g37820	-	-	3e-4	At5g02410	DIE2/ALG10 family	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.06	9.8	PtpAffx.19541.1.S1_at	At5g37820	hypothetical protein	-	1e+1	At5g65000	nucleotide-sugar transporter family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.05	8.3	PtpAffx.150481.1.S1_at	At5g37820	hypothetical protein	-	2e-12	At5g43930	transducin family protein / WD-40 repeat family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.03	5.2	PtpAffx.18257.1.S1_at	At5g37820	-	-	7e-37	At2g18400	ribosomal protein L6 family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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