Co-expression analysis

Gene ID	GmaAffx.82262.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At3g51770: ETO1 (ETHYLENE OVERPRODUCER 1) (HF=3e-28)
Module size	6 genes
NF	0.56
%ile	86.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.6	0.98	GmaAffx.82262.1.S1_at	BI786890	-	-	3e-28	At3g51770	ETO1 (ETHYLENE OVERPRODUCER 1)	O.I.	H.G.	S.X.	Please select
0.67	86.1	0.98	GmaAffx.36562.2.S1_at	BM731207	-	-	5e-15	At1g14970	unknown protein	O.I.	H.G.	S.X.	Please select
0.61	81.8	0.98	Gma.13878.1.S1_at	CD408791	-	-	5e+0	At5g01070	zinc finger (C3HC4-type RING finger) family protein	O.I.	H.G.	S.X.	Please select
0.53	74.2	0.98	GmaAffx.23963.1.S1_at	BQ080815	-	-	3e+0	At3g42310	unknown protein	O.I.	H.G.	S.X.	Please select
0.36	50.8	0.98	GmaAffx.39172.1.S1_at	BM094230	-	-	2e-5	At1g12340	-	O.I.	H.G.	S.X.	Please select
0.21	26.6	0.98	GmaAffx.33415.1.A1_at	BU547602	-	-	3e-1	At5g54145	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
31.4	99.9	GSM308559	Mature Soybean (Glycine max) pollen grains Replicate 2	GSE12286	Genomic Expression Profiling of Mature Soybean (Glycine max) Pollen
31.3	99.9	GSM308556	Mature Soybean (Glycine max) pollen grains replicate 1	GSE12286	Genomic Expression Profiling of Mature Soybean (Glycine max) Pollen
30.8	99.9	GSM308560	Mature Soybean (Glycine max) pollen grains Replicate 3	GSE12286	Genomic Expression Profiling of Mature Soybean (Glycine max) Pollen

Inter-species module comparison

A co-expression module including the wheat gene, Ta.19230.1.S1_a_at, orthologous to the query gene, GmaAffx.82262.1.S1_at

VF	%ile	Gene ID	Repr. ID	Gene Name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.87	94.2	Ta.19230.1.S1_a_at	At3g51770	-	-	4e-4	At4g02680	EOL1 (ETO1-LIKE 1)	O.I.	H.G.	S.X.	Please select
0.46	66.8	TaAffx.6788.1.S1_at	At3g51770	-	-	4e+0	At4g13150	unknown protein	O.I.	H.G.	S.X.	Please select
0.45	65.2	TaAffx.7591.1.S1_at	At3g51770	-	-	2e+1	Atmg01020	-	O.I.	H.G.	S.X.	Please select
0.45	65.2	TaAffx.122081.2.S1_at	At3g51770	-	-	3e+0	At5g64800	CLE21 (CLAVATA3/ESR-RELATED 21)	O.I.	H.G.	S.X.	Please select
0.42	60.9	TaAffx.36684.1.A1_at	At3g51770	-	-	2e-1	At5g14690	unknown protein	O.I.	H.G.	S.X.	Please select
0.42	60.9	TaAffx.112845.1.S1_at	At3g51770	-	-	2e+1	At1g72080	unknown protein	O.I.	H.G.	S.X.	Please select
0.41	59.6	TaAffx.80274.1.S1_at	At3g51770	-	-	2e+1	At5g10860	CBS domain-containing protein	O.I.	H.G.	S.X.	Please select
0.39	56.1	Ta.26661.1.A1_at	At3g51770	-	-	4e-10	At5g19760	dicarboxylate/tricarboxylate carrier (DTC)	O.I.	H.G.	S.X.	Please select
0.39	56.1	TaAffx.58571.1.S1_at	At3g51770	-	-	2e+1	At1g80050	APT2 (ADENINE PHOSPHORIBOSYL TRANSFERASE 2)	O.I.	H.G.	S.X.	Please select
0.37	53.0	TaAffx.107754.1.S1_at	At3g51770	-	-	1e+0	At2g21780	unknown protein	O.I.	H.G.	S.X.	Please select
0.36	51.9	TaAffx.38217.1.S1_at	At3g51770	-	-	7e+0	At5g11690	ATTIM17-3	O.I.	H.G.	S.X.	Please select
0.35	49.8	TaAffx.58160.1.S1_at	At3g51770	-	-	6e+0	At1g61780	postsynaptic protein-related	O.I.	H.G.	S.X.	Please select
0.35	49.8	TaAffx.107179.1.S1_at	At3g51770	-	-	8e-1	At3g60760	unknown protein	O.I.	H.G.	S.X.	Please select
0.34	48.1	TaAffx.31269.1.S1_at	At3g51770	-	-	2e+0	At3g03010	aminoacyl-tRNA hydrolase	O.I.	H.G.	S.X.	Please select
0.32	44.4	TaAffx.5873.1.S1_at	At3g51770	-	-	6e-1	At1g11210	unknown protein	O.I.	H.G.	S.X.	Please select
0.31	42.7	Ta.5023.2.A1_at	At3g51770	-	-	1e+0	At5g05090	myb family transcription factor	O.I.	H.G.	S.X.	Please select
0.31	42.7	TaAffx.77881.1.S1_at	At3g51770	-	-	2e+1	Atcg00065	-	O.I.	H.G.	S.X.	Please select
0.30	40.9	TaAffx.8070.1.S1_at	At3g51770	-	-	3e+0	At2g35075	unknown protein	O.I.	H.G.	S.X.	Please select
0.23	29.0	Ta.8195.2.S1_at	At3g51770	-	-	2e-6	At1g68010	HPR	O.I.	H.G.	S.X.	Please select
0.22	27.1	Ta.6759.2.S1_at	At3g51770	-	-	2e+0	At5g63310	NDPK2 (NUCLEOSIDE DIPHOSPHATE KINASE 2)	O.I.	H.G.	S.X.	Please select
0.21	25.5	TaAffx.78382.1.S1_at	At3g51770	-	-	2e+0	At2g31140	-	O.I.	H.G.	S.X.	Please select
0.21	25.5	TaAffx.24685.1.S1_at	At3g51770	-	-	3e+0	At2g36080	DNA-binding protein, putative	O.I.	H.G.	S.X.	Please select
0.20	24.0	TaAffx.38406.1.S1_at	At3g51770	-	-	4e+0	At5g64260	EXL2 (EXORDIUM LIKE 2)	O.I.	H.G.	S.X.	Please select
0.14	15.8	TaAffx.39299.1.S1_at	At3g51770	-	-	2e+0	At5g23395	-	O.I.	H.G.	S.X.	Please select

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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