Co-expression analysis

Gene ID GmaAffx.82262.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At3g51770: ETO1 (ETHYLENE OVERPRODUCER 1) (HF=3e-28)
Module size 6 genes
NF 0.56
%ile 86.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.60.98GmaAffx.82262.1.S1_atBI786890--3e-28At3g51770ETO1 (ETHYLENE OVERPRODUCER 1)O.I.H.G.S.X.
0.6786.10.98GmaAffx.36562.2.S1_atBM731207--5e-15At1g14970unknown proteinO.I.H.G.S.X.
0.6181.80.98Gma.13878.1.S1_atCD408791--5e+0At5g01070zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.5374.20.98GmaAffx.23963.1.S1_atBQ080815--3e+0At3g42310unknown proteinO.I.H.G.S.X.
0.2126.60.98GmaAffx.33415.1.A1_atBU547602--3e-1At5g54145unknown proteinO.I.H.G.S.X.

Click More genes

Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
31.499.9GSM308559Mature Soybean (Glycine max) pollen grains Replicate 2GSE12286Genomic Expression Profiling of Mature Soybean (Glycine max) PollenLink to GEO
31.399.9GSM308556Mature Soybean (Glycine max) pollen grains replicate 1GSE12286Genomic Expression Profiling of Mature Soybean (Glycine max) PollenLink to GEO
30.899.9GSM308560Mature Soybean (Glycine max) pollen grains Replicate 3GSE12286Genomic Expression Profiling of Mature Soybean (Glycine max) PollenLink to GEO

Inter-species module comparison

A co-expression module including the barley gene, Contig14788_at, orthologous to the query gene, GmaAffx.82262.1.S1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.9198.1Contig14788_atAt3g51770--4e-18At3g51770ETO1 (ETHYLENE OVERPRODUCER 1)O.I.H.G.S.X.
0.4458.9Contig6680_atAt3g51770--2e-1At2g23560MES7 (METHYL ESTERASE 7)O.I.H.G.S.X.
0.2935.5Contig44_atAt3g51770--3e-23At5g02500HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1)O.I.H.G.S.X.
0.2935.5Contig14913_atAt3g51770--1e+0At5g38160protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.

Back to the CoP portal site

Back to the KAGIANA project homepage