Co-expression analysis

Gene ID	GmaAffx.81888.1.S1_at
Gene name	serine/threonine kinase-related protein
Homology with Arabidopsis	Similar to At4g23270: protein kinase family protein (HF=5e-7)
Module size	6 genes
NF	0.21
%ile	44.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.61	81.8	0.97	GmaAffx.81888.1.S1_at	BE210383	serine/threonine kinase-related protein	-	5e-7	At4g23270	protein kinase family protein	O.I.	H.G.	S.X.	Please select
0.40	57.1	0.97	Gma.3675.1.S1_at	BI969908	-	-	9e-72	At4g01370	ATMPK4 (ARABIDOPSIS THALIANA MAP KINASE 4)	O.I.	H.G.	S.X.	Please select
0.38	53.3	0.97	Gma.10384.1.S1_at	BE658298	mitogen-activated protein kinase kinase MAPKK2	-	4e+0	At4g02210	unknown protein	O.I.	H.G.	S.X.	Please select
0.18	22.3	0.97	Gma.7876.1.S1_at	BU550811	-	-	1e+0	At3g20060	UBC19 (ubiquitin-conjugating enzyme19)	O.I.	H.G.	S.X.	Please select
0.15	18.7	0.97	GmaAffx.39725.1.S1_at	BI945410	-	-	8e-1	At3g57280	unknown protein	O.I.	H.G.	S.X.	Please select
0.10	13.0	0.97	Gma.6708.1.A1_at	BQ610551	-	-	3e-4	At1g67890	protein kinase family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO

Inter-species module comparison

A co-expression module including the barley gene, Contig16360_at, orthologous to the query gene, GmaAffx.81888.1.S1_at

VF	%ile	Gene ID	Repr. ID	Gene Name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.83	94.0	Contig16360_at	At4g23270	-	-	7e-3	At4g21366	ATP binding / protein tyrosine kinase	O.I.	H.G.	S.X.	Please select
0.73	88.7	HV_CEa0012J19r2_at	At4g23270	-	-	2e+1	Atcg00440	-	O.I.	H.G.	S.X.	Please select
0.63	80.3	Contig14348_at	At4g23270	-	-	3e-3	At1g71692	AGL12 (AGAMOUS-LIKE 12)	O.I.	H.G.	S.X.	Please select
0.55	72.0	HVSMEb0006O18r2_at	At4g23270	-	-	1e+1	At2g20180	PIL5 (PHYTOCHROME INTERACTING FACTOR 3-LIKE 5)	O.I.	H.G.	S.X.	Please select
0.55	72.0	Contig5424_at	At4g23270	-	-	6e-1	At1g80400	zinc finger (C3HC4-type RING finger) family protein	O.I.	H.G.	S.X.	Please select
0.53	69.7	Contig1216_s_at	At4g23270	-	-	3e-12	At2g37180	RD28 (RESPONSIVE TO DESICCATION 28)	O.I.	H.G.	S.X.	Please select

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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