Co-expression analysis

Gene ID	GmaAffx.81888.1.S1_at
Gene name	serine/threonine kinase-related protein
Homology with Arabidopsis	Similar to At4g23270: protein kinase family protein (HF=5e-7)
Module size	6 genes
NF	0.21
%ile	44.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.61	81.8	0.97	GmaAffx.81888.1.S1_at	BE210383	serine/threonine kinase-related protein	-	5e-7	At4g23270	protein kinase family protein	O.I.	H.G.	S.X.	Please select
0.40	57.1	0.97	Gma.3675.1.S1_at	BI969908	-	-	9e-72	At4g01370	ATMPK4 (ARABIDOPSIS THALIANA MAP KINASE 4)	O.I.	H.G.	S.X.	Please select
0.38	53.3	0.97	Gma.10384.1.S1_at	BE658298	mitogen-activated protein kinase kinase MAPKK2	-	4e+0	At4g02210	unknown protein	O.I.	H.G.	S.X.	Please select
0.18	22.3	0.97	Gma.7876.1.S1_at	BU550811	-	-	1e+0	At3g20060	UBC19 (ubiquitin-conjugating enzyme19)	O.I.	H.G.	S.X.	Please select
0.15	18.7	0.97	GmaAffx.39725.1.S1_at	BI945410	-	-	8e-1	At3g57280	unknown protein	O.I.	H.G.	S.X.	Please select
0.10	13.0	0.97	Gma.6708.1.A1_at	BQ610551	-	-	3e-4	At1g67890	protein kinase family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO

Inter-species module comparison

A co-expression module including the Arabidopsis gene, At4g23270, orthologous to the query gene, GmaAffx.81888.1.S1_at

VF	%ile	Gene ID	Repr. ID	Gene Name	Func.	O.I.	H.G.	S.X.	Other DB
0.30	32.1	At4g23270	828426	protein kinase family protein	F:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVA	O.I.	H.G.	S.X.	Please selectTAIR (integral)KEGG (integral)PlantTribes (integral)Gramene (integral)MPSS (genome)InParanoid (ortholog)Plant RBP (ortholog)SIGnAL (T-DNA)RAFL (full-length clone)AtGDB (genome)Genevestigator (expression)eFP Browser (expression)AVT (expression)ATTED-II (co-expression)AtcisDB (cis-element)SUBA (hydropathy)AtProteomePlant Proteome DatabasePMN (pathway)KaPPA-View 4 (pathway)RnR (over-expression)iHOP (report)
0.40	50.8	At4g11850	826791	PLDGAMMA1	phospholipase D (gamma)	O.I.	H.G.	S.X.	Please selectTAIR (integral)KEGG (integral)PlantTribes (integral)Gramene (integral)MPSS (genome)InParanoid (ortholog)Plant RBP (ortholog)SIGnAL (T-DNA)RAFL (full-length clone)AtGDB (genome)Genevestigator (expression)eFP Browser (expression)AVT (expression)ATTED-II (co-expression)AtcisDB (cis-element)SUBA (hydropathy)AtProteomePlant Proteome DatabasePMN (pathway)KaPPA-View 4 (pathway)RnR (over-expression)iHOP (report)
0.30	32.1	At2g20960	816630	pEARLI4	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFOBPVA	O.I.	H.G.	S.X.	Please selectTAIR (integral)KEGG (integral)PlantTribes (integral)Gramene (integral)MPSS (genome)InParanoid (ortholog)Plant RBP (ortholog)SIGnAL (T-DNA)RAFL (full-length clone)AtGDB (genome)Genevestigator (expression)eFP Browser (expression)AVT (expression)ATTED-II (co-expression)AtcisDB (cis-element)SUBA (hydropathy)AtProteomePlant Proteome DatabasePMN (pathway)KaPPA-View 4 (pathway)RnR (over-expression)iHOP (report)
0.26	24.4	At1g18390	838420	ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase	F:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVA	O.I.	H.G.	S.X.	Please selectTAIR (integral)KEGG (integral)PlantTribes (integral)Gramene (integral)MPSS (genome)InParanoid (ortholog)Plant RBP (ortholog)SIGnAL (T-DNA)RAFL (full-length clone)AtGDB (genome)Genevestigator (expression)eFP Browser (expression)AVT (expression)ATTED-II (co-expression)AtcisDB (cis-element)SUBA (hydropathy)AtProteomePlant Proteome DatabasePMN (pathway)KaPPA-View 4 (pathway)RnR (over-expression)iHOP (report)
0.23	19.3	At4g08850	826456	kinase	F:kinase activity;P:protein amino acid phosphorylation;C:plasma membrane, membrane;MPOBFVA	O.I.	H.G.	S.X.	Please selectTAIR (integral)KEGG (integral)PlantTribes (integral)Gramene (integral)MPSS (genome)InParanoid (ortholog)Plant RBP (ortholog)SIGnAL (T-DNA)RAFL (full-length clone)AtGDB (genome)Genevestigator (expression)eFP Browser (expression)AVT (expression)ATTED-II (co-expression)AtcisDB (cis-element)SUBA (hydropathy)AtProteomePlant Proteome DatabasePMN (pathway)KaPPA-View 4 (pathway)RnR (over-expression)iHOP (report)

Select a plant to compare co-expressed genes between species.

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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