Co-expression analysis

Gene ID	GmaAffx.80018.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At3g02510: regulator of chromosome condensation (RCC1) family protein (HF=1e-22)
Module size	6 genes
NF	0.07
%ile	22.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.6	0.98	GmaAffx.80018.1.S1_at	BF071726	-	-	1e-22	At3g02510	regulator of chromosome condensation (RCC1) family protein	O.I.	H.G.	S.X.	Please select
0.18	22.3	0.98	Gma.12707.2.S1_at	BM891742	-	-	3e+0	At5g10310	unknown protein	O.I.	H.G.	S.X.	Please select
0.15	18.7	0.98	GmaAffx.86812.1.S1_at	BU763556	-	-	3e-8	At5g42520	ATBPC6	O.I.	H.G.	S.X.	Please select
0.12	15.1	0.98	Gma.7945.1.S1_at	BU551250	-	-	2e-36	At5g16040	regulator of chromosome condensation (RCC1) family protein	O.I.	H.G.	S.X.	Please select
0.05	8.0	0.98	GmaAffx.12516.1.S1_at	AW277285	-	-	3e-4	At3g58460	ATRBL15 (ARABIDOPSIS RHOMBOID-LIKE PROTEIN 15)	O.I.	H.G.	S.X.	Please select
0.03	5.8	0.98	GmaAffx.84623.1.S1_at	BQ298236	-	-	1e-12	At1g05500	NTMC2T2.1	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO

Inter-species module comparison

A co-expression module including the maize gene, Zm.3132.1.A1_at, orthologous to the query gene, GmaAffx.80018.1.S1_at

VF	%ile	Gene ID	Repr. ID	Gene Name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	99.0	Zm.3132.1.A1_at	At3g02510	hypothetical protein LOC100273996	-	1e-7	At3g02510	regulator of chromosome condensation (RCC1) family protein	O.I.	H.G.	S.X.	Please select
0.67	85.8	ZmAffx.1187.1.A1_at	At3g02510	-	-	3e+0	At4g29033	-	O.I.	H.G.	S.X.	Please select
0.56	74.4	ZmAffx.160.1.A1_at	At3g02510	-	-	8e-1	At4g24380	unknown protein	O.I.	H.G.	S.X.	Please select
0.53	69.1	Zm.18381.1.A1_s_at	At3g02510	Hypothetical protein LOC100216796	-	4e-1	At3g03720	CAT4 (CATIONIC AMINO ACID TRANSPORTER 4)	O.I.	H.G.	S.X.	Please select
0.50	65.7	Zm.1140.1.S1_at	At3g02510	hypothetical protein LOC100279272	-	4e-14	At3g49670	BAM2 (BARELY ANY MERISTEM 2)	O.I.	H.G.	S.X.	Please select
0.25	21.3	ZmAffx.195.1.A1_at	At3g02510	-	-	1e+1	At5g21005	unknown protein	O.I.	H.G.	S.X.	Please select

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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