Co-expression analysis

Gene ID	GmaAffx.80018.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At3g02510: regulator of chromosome condensation (RCC1) family protein (HF=1e-22)
Module size	6 genes
NF	0.07
%ile	22.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.6	0.98	GmaAffx.80018.1.S1_at	BF071726	-	-	1e-22	At3g02510	regulator of chromosome condensation (RCC1) family protein	O.I.	H.G.	S.X.	Please select
0.18	22.3	0.98	Gma.12707.2.S1_at	BM891742	-	-	3e+0	At5g10310	unknown protein	O.I.	H.G.	S.X.	Please select
0.15	18.7	0.98	GmaAffx.86812.1.S1_at	BU763556	-	-	3e-8	At5g42520	ATBPC6	O.I.	H.G.	S.X.	Please select
0.12	15.1	0.98	Gma.7945.1.S1_at	BU551250	-	-	2e-36	At5g16040	regulator of chromosome condensation (RCC1) family protein	O.I.	H.G.	S.X.	Please select
0.05	8.0	0.98	GmaAffx.12516.1.S1_at	AW277285	-	-	3e-4	At3g58460	ATRBL15 (ARABIDOPSIS RHOMBOID-LIKE PROTEIN 15)	O.I.	H.G.	S.X.	Please select
0.03	5.8	0.98	GmaAffx.84623.1.S1_at	BQ298236	-	-	1e-12	At1g05500	NTMC2T2.1	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO

Inter-species module comparison

A co-expression module including the grape gene, 1613080_at, orthologous to the query gene, GmaAffx.80018.1.S1_at

VF	%ile	Gene ID	Repr. ID	Gene Name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.55	77.3	1613080_at	At3g02510	hypothetical protein LOC100265192	-	6e-53	At3g02510	regulator of chromosome condensation (RCC1) family protein	O.I.	H.G.	S.X.	Please select
0.17	18.2	1607788_at	At3g02510	hypothetical protein LOC100254226	-	7e-19	At5g11270	OCP3 (OVEREXPRESSOR OF CATIONIC PEROXIDASE 3)	O.I.	H.G.	S.X.	Please select
0.15	15.6	1617071_at	At3g02510	hypothetical protein LOC100242446	-	1e-1	At1g34790	TT1 (transparent testa 1)	O.I.	H.G.	S.X.	Please select
0.10	10.3	1613886_at	At3g02510	hypothetical protein LOC100257655	-	4e+0	At4g08570	heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related	O.I.	H.G.	S.X.	Please select
0.10	10.3	1609843_at	At3g02510	hypothetical protein LOC100242269	-	2e+0	At5g54790	unknown protein	O.I.	H.G.	S.X.	Please select
0.06	6.8	1619354_s_at	At3g02510	hypothetical protein LOC100255079	-	2e-40	At4g22220	ISU1	O.I.	H.G.	S.X.	Please select

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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