Co-expression analysis

Gene ID	GmaAffx.80018.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At3g02510: regulator of chromosome condensation (RCC1) family protein (HF=1e-22)
Module size	6 genes
NF	0.07
%ile	22.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.6	0.98	GmaAffx.80018.1.S1_at	BF071726	-	-	1e-22	At3g02510	regulator of chromosome condensation (RCC1) family protein	O.I.	H.G.	S.X.	Please select
0.18	22.3	0.98	Gma.12707.2.S1_at	BM891742	-	-	3e+0	At5g10310	unknown protein	O.I.	H.G.	S.X.	Please select
0.15	18.7	0.98	GmaAffx.86812.1.S1_at	BU763556	-	-	3e-8	At5g42520	ATBPC6	O.I.	H.G.	S.X.	Please select
0.12	15.1	0.98	Gma.7945.1.S1_at	BU551250	-	-	2e-36	At5g16040	regulator of chromosome condensation (RCC1) family protein	O.I.	H.G.	S.X.	Please select
0.05	8.0	0.98	GmaAffx.12516.1.S1_at	AW277285	-	-	3e-4	At3g58460	ATRBL15 (ARABIDOPSIS RHOMBOID-LIKE PROTEIN 15)	O.I.	H.G.	S.X.	Please select
0.03	5.8	0.98	GmaAffx.84623.1.S1_at	BQ298236	-	-	1e-12	At1g05500	NTMC2T2.1	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO

Inter-species module comparison

A co-expression module including the wheat gene, Ta.14519.1.S1_x_at, orthologous to the query gene, GmaAffx.80018.1.S1_at

VF	%ile	Gene ID	Repr. ID	Gene Name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.76	90.1	Ta.14519.1.S1_x_at	At3g02510	-	-	4e-15	At5g16040	regulator of chromosome condensation (RCC1) family protein	O.I.	H.G.	S.X.	Please select
0.67	86.3	Ta.27688.1.A1_x_at	At3g02510	-	-	4e-1	At3g51720	unknown protein	O.I.	H.G.	S.X.	Please select
0.48	69.0	Ta.2915.1.S1_a_at	At3g02510	-	-	4e+0	At5g48890	transcription factor	O.I.	H.G.	S.X.	Please select
0.44	64.5	Ta.1943.1.S1_at	At3g02510	-	-	1e-8	At2g03780	translin family protein	O.I.	H.G.	S.X.	Please select
0.44	64.5	Ta.3109.1.A1_x_at	At3g02510	-	-	3e+0	At4g03070	AOP1	O.I.	H.G.	S.X.	Please select
0.44	64.5	Ta.9357.2.S1_x_at	At3g02510	-	-	2e-2	At1g32860	glycosyl hydrolase family 17 protein	O.I.	H.G.	S.X.	Please select
0.42	60.9	TaAffx.70783.1.A1_at	At3g02510	-	-	4e+0	At3g48840	nucleic acid binding / nucleotide binding	O.I.	H.G.	S.X.	Please select
0.39	56.1	TaAffx.53794.1.S1_at	At3g02510	-	-	2e-14	At3g51270	ATP binding / catalytic/ protein serine/threonine kinase	O.I.	H.G.	S.X.	Please select
0.35	49.8	Ta.9357.2.S1_at	At3g02510	-	-	2e-2	At1g32860	glycosyl hydrolase family 17 protein	O.I.	H.G.	S.X.	Please select
0.28	39.2	Ta.3345.1.S1_a_at	At3g02510	pre-mRNA processing factor	-	3e-21	At2g24590	splicing factor, putative	O.I.	H.G.	S.X.	Please select
0.23	29.0	Ta.25292.1.S1_at	At3g02510	-	-	2e-13	At5g48530	unknown protein	O.I.	H.G.	S.X.	Please select
0.20	24.0	Ta.24545.1.S1_at	At3g02510	-	-	4e-9	At4g02220	zinc finger (MYND type) family protein / programmed cell death 2 C-terminal domain-containing protein	O.I.	H.G.	S.X.	Please select
0.17	19.8	Ta.6563.1.A1_at	At3g02510	-	-	3e-8	At2g06990	HEN2 (hua enhancer 2)	O.I.	H.G.	S.X.	Please select

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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