Co-expression analysis

Gene ID	GmaAffx.80018.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At3g02510: regulator of chromosome condensation (RCC1) family protein (HF=1e-22)
Module size	6 genes
NF	0.07
%ile	22.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.6	0.98	GmaAffx.80018.1.S1_at	BF071726	-	-	1e-22	At3g02510	regulator of chromosome condensation (RCC1) family protein	O.I.	H.G.	S.X.	Please select
0.18	22.3	0.98	Gma.12707.2.S1_at	BM891742	-	-	3e+0	At5g10310	unknown protein	O.I.	H.G.	S.X.	Please select
0.15	18.7	0.98	GmaAffx.86812.1.S1_at	BU763556	-	-	3e-8	At5g42520	ATBPC6	O.I.	H.G.	S.X.	Please select
0.12	15.1	0.98	Gma.7945.1.S1_at	BU551250	-	-	2e-36	At5g16040	regulator of chromosome condensation (RCC1) family protein	O.I.	H.G.	S.X.	Please select
0.05	8.0	0.98	GmaAffx.12516.1.S1_at	AW277285	-	-	3e-4	At3g58460	ATRBL15 (ARABIDOPSIS RHOMBOID-LIKE PROTEIN 15)	O.I.	H.G.	S.X.	Please select
0.03	5.8	0.98	GmaAffx.84623.1.S1_at	BQ298236	-	-	1e-12	At1g05500	NTMC2T2.1	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO

Inter-species module comparison

A co-expression module including the poplar gene, PtpAffx.215447.1.S1_at, orthologous to the query gene, GmaAffx.80018.1.S1_at

VF	%ile	Gene ID	Repr. ID	Gene Name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.60	86.0	PtpAffx.215447.1.S1_at	At3g02510	hypothetical protein	-	4e-73	At3g02510	regulator of chromosome condensation (RCC1) family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.61	87.0	PtpAffx.67207.1.S1_at	At3g02510	-	-	5e-1	At5g28780	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.57	84.2	PtpAffx.61027.1.S1_at	At3g02510	hypothetical protein	-	1e-17	At2g26230	uricase / urate oxidase / nodulin 35, putative	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.53	80.5	PtpAffx.39620.1.S1_at	At3g02510	hypothetical protein	-	3e-54	At2g19450	TAG1 (TRIACYLGLYCEROL BIOSYNTHESIS DEFECT 1)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.50	78.6	Ptp.5845.1.S1_s_at	At3g02510	hypothetical protein	-	4e-58	At5g63680	pyruvate kinase, putative	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.50	78.6	Ptp.4054.1.S1_s_at	At3g02510	hypothetical protein	-	7e-65	At2g36530	LOS2	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.48	75.4	Ptp.6097.1.S1_x_at	At3g02510	hypothetical protein	-	5e-85	At2g36530	LOS2	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.47	74.6	PtpAffx.36311.1.S1_s_at	At3g02510	hypothetical protein	-	1e-1	At2g36530	LOS2	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.43	69.7	PtpAffx.116198.1.S1_s_at	At3g02510	hypothetical protein	-	6e-2	At1g30880	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.43	69.7	PtpAffx.96911.1.S1_at	At3g02510	hypothetical protein	-	1e-4	At1g45976	SBP1 (s-ribonuclease binding protein 1)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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