Co-expression analysis

Gene ID GmaAffx.79891.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At3g28440: unknown protein (HF=3e+0)
Module size 6 genes
NF 0.60
%ile 90.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6382.90.60GmaAffx.79891.1.S1_atAI988440--3e+0At3g28440unknown proteinO.I.H.G.S.X.
0.6181.80.78GmaAffx.4508.1.S1_atBI316036--1e-2At2g30560glycine-rich proteinO.I.H.G.S.X.
0.5778.80.79Gma.27.1.S1_atX69156.1nodulin-8e-2At5g17550PEX19-2O.I.H.G.S.X.
0.5576.30.87Gma.8426.1.S1_atD13505.1early nodulin-2e-2At3g15990SULTR3O.I.H.G.S.X.
0.5071.70.87Gma.5121.1.A1_atAW309540--9e-1At3g52620unknown proteinO.I.H.G.S.X.
0.4665.50.85Gma.14.1.S1_atD13502.1early nodulin-2e+0At1g52415-O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
26.899.8GSM29231563_C080.1E.R9E2P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
22.399.8GSM29267424_C163.1J.V7J1L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
17.099.7GSM29272570_C172.1J.V7J2P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
12.999.5GSM29227620_C079.1E.R9E2L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
9.699.2GSM29230754_C083.1E.V7E2U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
8.699.1GSM29242326_C116.1G.R9G2P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
7.598.9GSM29272167_C163.1J.V7J1U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
7.398.9GSM29228025_1199.1E.R123L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
7.098.8GSM29263461_C158.1I.SLI3P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
6.798.7GSM29232976_1191.1E.R116L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
6.698.7GSM29270451_C171.1J.V7J2L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
4.797.8GSM29230451_1178.1E.R109P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
4.597.7GSM29230249_C073.1E.V7E1L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.796.8GSM29260635_1332.1I.R208P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO

Inter-species module comparison

A co-expression module including the wheat gene, TaAffx.12442.1.A1_at, orthologous to the query gene, GmaAffx.79891.1.S1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.9298.5TaAffx.12442.1.A1_atAt3g28440--4e-3At3g48310CYP71A22O.I.H.G.S.X.
0.7790.8Ta.22681.1.S1_atAt3g28440--3e+0At1g54775-O.I.H.G.S.X.
0.6786.3TaAffx.38460.1.S1_s_atAt3g28440--7e+0At4g35210unknown proteinO.I.H.G.S.X.
0.6583.9TaAffx.5613.1.S1_atAt3g28440--1e+0At2g22890small conjugating protein ligaseO.I.H.G.S.X.
0.6383.1Ta.20001.1.A1_atAt3g28440--2e+1At5g64620C/VIF2 (CELL WALL / VACUOLAR INHIBITOR OF FRUCTOSIDASE 2)O.I.H.G.S.X.
0.6081.0TaAffx.80403.1.S1_atAt3g28440--1e+1At5g07600oleosin / glycine-rich proteinO.I.H.G.S.X.
0.6081.0Ta.9445.1.A1_atAt3g28440--2e+0At4g25220transporter, putativeO.I.H.G.S.X.
0.5979.8TaAffx.38460.1.S1_atAt3g28440--7e+0At4g35210unknown proteinO.I.H.G.S.X.
0.5979.8TaAffx.84382.1.S1_atAt3g28440--5e-2At4g05530IBR1 (INDOLE-3-BUTYRIC ACID RESPONSE 1)O.I.H.G.S.X.
0.5779.2TaAffx.19096.1.S1_atAt3g28440--7e+0At2g27730unknown proteinO.I.H.G.S.X.
0.5678.6TaAffx.16905.1.A1_atAt3g28440--3e-1At5g53880unknown proteinO.I.H.G.S.X.
0.5678.6TaAffx.113505.1.S1_atAt3g28440--1e+0At3g09970calcineurin-like phosphoesterase family proteinO.I.H.G.S.X.
0.5576.8Ta.7351.2.S1_atAt3g28440--2e-2At1g18790RWP-RK domain-containing proteinO.I.H.G.S.X.
0.4969.7Ta.7351.2.S1_x_atAt3g28440--2e-2At1g18790RWP-RK domain-containing proteinO.I.H.G.S.X.
0.4666.8TaAffx.54958.1.A1_atAt3g28440--1e+1At5g66550Maf family proteinO.I.H.G.S.X.
0.4464.5Ta.9332.2.A1_x_atAt3g28440--3e+0At4g31500CYP83B1 (CYTOCHROME P450 MONOOXYGENASE 83B1)O.I.H.G.S.X.
0.3956.1TaAffx.43652.2.A1_atAt3g28440--3e-1At5g42190ASK2 (ARABIDOPSIS SKP1-LIKE 2)O.I.H.G.S.X.
0.3753.0Ta.9332.2.A1_atAt3g28440--3e+0At4g31500CYP83B1 (CYTOCHROME P450 MONOOXYGENASE 83B1)O.I.H.G.S.X.
0.3549.8Ta.9332.1.S1_x_atAt3g28440--4e+0At4g31500CYP83B1 (CYTOCHROME P450 MONOOXYGENASE 83B1)O.I.H.G.S.X.
0.3448.1Ta.7351.1.S1_x_atAt3g28440--1e-1At1g47970unknown proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage