Co-expression analysis

Gene ID GmaAffx.79891.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At3g28440: unknown protein (HF=3e+0)
Module size 6 genes
NF 0.60
%ile 90.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6382.90.60GmaAffx.79891.1.S1_atAI988440--3e+0At3g28440unknown proteinO.I.H.G.S.X.
0.6181.80.78GmaAffx.4508.1.S1_atBI316036--1e-2At2g30560glycine-rich proteinO.I.H.G.S.X.
0.5778.80.79Gma.27.1.S1_atX69156.1nodulin-8e-2At5g17550PEX19-2O.I.H.G.S.X.
0.5576.30.87Gma.8426.1.S1_atD13505.1early nodulin-2e-2At3g15990SULTR3O.I.H.G.S.X.
0.5071.70.87Gma.5121.1.A1_atAW309540--9e-1At3g52620unknown proteinO.I.H.G.S.X.
0.4665.50.85Gma.14.1.S1_atD13502.1early nodulin-2e+0At1g52415-O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
26.899.8GSM29231563_C080.1E.R9E2P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
22.399.8GSM29267424_C163.1J.V7J1L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
17.099.7GSM29272570_C172.1J.V7J2P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
12.999.5GSM29227620_C079.1E.R9E2L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
9.699.2GSM29230754_C083.1E.V7E2U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
8.699.1GSM29242326_C116.1G.R9G2P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
7.598.9GSM29272167_C163.1J.V7J1U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
7.398.9GSM29228025_1199.1E.R123L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
7.098.8GSM29263461_C158.1I.SLI3P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
6.798.7GSM29232976_1191.1E.R116L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
6.698.7GSM29270451_C171.1J.V7J2L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
4.797.8GSM29230451_1178.1E.R109P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
4.597.7GSM29230249_C073.1E.V7E1L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.796.8GSM29260635_1332.1I.R208P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO

Inter-species module comparison

A co-expression module including the barley gene, HB08E19r_x_at, orthologous to the query gene, GmaAffx.79891.1.S1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.9498.9HB08E19r_x_atAt3g28440--3e+0At5g57340unknown proteinO.I.H.G.S.X.
0.98100.0Contig12012_atAt3g28440--1e+0At1g31040unknown proteinO.I.H.G.S.X.
0.98100.0HD08L09r_atAt3g28440--4e+0At2g40085unknown proteinO.I.H.G.S.X.
0.98100.0HB11D23r_x_atAt3g28440--2e+0At2g14110-O.I.H.G.S.X.
0.98100.0HB25F09r_x_atAt3g28440--6e+0At4g36515unknown proteinO.I.H.G.S.X.
0.98100.0HD04G09u_atAt3g28440--1e+0At2g46690auxin-responsive family proteinO.I.H.G.S.X.
0.98100.0EBma03_SQ002_D19_atAt3g28440--1e+0At5g57391unknown proteinO.I.H.G.S.X.
0.98100.0HF09N12r_atAt3g28440--1e-1At5g39330unknown proteinO.I.H.G.S.X.
0.9699.4HF13L09r_atAt3g28440--3e+0At4g10430-O.I.H.G.S.X.
0.9699.4HM11M18r_atAt3g28440--9e-1At2g27160unknown proteinO.I.H.G.S.X.
0.9699.4HB04I10r_x_atAt3g28440--5e+0At5g56230PRA1.G2 (PRENYLATED RAB ACCEPTOR 1.G2)O.I.H.G.S.X.
0.9699.4HB04I10r_atAt3g28440--5e+0At5g56230PRA1.G2 (PRENYLATED RAB ACCEPTOR 1.G2)O.I.H.G.S.X.
0.9699.4HM05O11r_atAt3g28440--5e-1At2g17540unknown proteinO.I.H.G.S.X.
0.9498.9Contig24884_atAt3g28440--1e-1At5g10140FLC (FLOWERING LOCUS C)O.I.H.G.S.X.
0.9498.9HB14P07r_atAt3g28440--6e+0At5g17810WOX12 (WUSCHEL related homeobox 12)O.I.H.G.S.X.
0.9498.9EBma08_SQ002_F06_atAt3g28440--9e-1At3g43170unknown proteinO.I.H.G.S.X.
0.9498.9Contig11232_atAt3g28440--1e-4At3g26790FUS3 (FUSCA 3)O.I.H.G.S.X.
0.9498.9Contig25644_atAt3g28440--4e+0At4g19003VPS25O.I.H.G.S.X.
0.9298.4HU11N21r_x_atAt3g28440--2e+0At5g57340unknown proteinO.I.H.G.S.X.
0.9298.4HF14A04r_atAt3g28440--2e+0At5g22240OFP10O.I.H.G.S.X.
0.8995.4Contig1675_s_atAt3g28440--7e+0Atmg01090-O.I.H.G.S.X.
0.8995.4HZ01M13u_atAt3g28440--4e+0At3g25730AP2 domain-containing transcription factor, putativeO.I.H.G.S.X.
0.8995.4Contig21830_atAt3g28440--1e+0At3g17660AGD15 (ARF-GAP domain 15)O.I.H.G.S.X.
0.8694.8HD06J14r_atAt3g28440--3e+1At5g38790unknown proteinO.I.H.G.S.X.
0.8494.3Contig204_s_atAt3g28440--5e-43At1g09200histone H3O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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