Co-expression analysis

Gene ID GmaAffx.79189.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g39890: unknown protein (HF=2e-11)
Module size 6 genes
NF 0.02
%ile 10.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4259.30.93GmaAffx.79189.1.S1_atBF596987--2e-11At5g39890unknown proteinO.I.H.G.S.X.
0.1721.20.92GmaAffx.18766.1.S1_atBI972133--5e-2At2g37910cation/hydrogen exchanger, putative (CHX21)O.I.H.G.S.X.
0.1013.00.92GmaAffx.42302.1.S1_atBQ630446--7e-14At1g09010glycoside hydrolase family 2 proteinO.I.H.G.S.X.
0.0710.20.93GmaAffx.66333.1.S1_atAW200709--4e-19At5g15120unknown proteinO.I.H.G.S.X.
0.013.40.93GmaAffx.75390.1.S1_atBG359611--3e-1At5g07475plastocyanin-like domain-containing proteinO.I.H.G.S.X.
0.013.40.94Gma.5505.1.S1_atBI942102--0At3g04120GAPC1 (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE C SUBUNIT 1)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.198.1GSM309530storage protein suppression expt, RNAi biol rep2, tech rep1GSE12314Storage Protein Suppression in Transgenic Soybean CotyledonsLink to GEO
5.198.1GSM309557storage protein suppression expt, RNAi biol rep1, tech rep2GSE12314Storage Protein Suppression in Transgenic Soybean CotyledonsLink to GEO
5.098.0GSM309529storage protein suppression expt, RNAi biol rep1, tech rep1GSE12314Storage Protein Suppression in Transgenic Soybean CotyledonsLink to GEO
5.098.0GSM309531storage protein suppression expt, RNAi biol rep2, tech rep2GSE12314Storage Protein Suppression in Transgenic Soybean CotyledonsLink to GEO
4.897.9GSM309528storage protein suppression expt, control tech rep2GSE12314Storage Protein Suppression in Transgenic Soybean CotyledonsLink to GEO
4.797.8GSM309527storage protein suppression expt, control tech rep1GSE12314Storage Protein Suppression in Transgenic Soybean CotyledonsLink to GEO
3.796.8GSM309342Wild type 2GSE12300Suppression of oleosin in soybean cotyledonLink to GEO
3.696.7GSM309341Wild type 1GSE12300Suppression of oleosin in soybean cotyledonLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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