Co-expression analysis

Gene ID GmaAffx.79049.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g49448: CPuORF4 (Conserved peptide upstream open reading frame 4) (HF=3e+0)
Module size 38 genes
NF 0.43
%ile 72.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9799.80.98GmaAffx.79049.1.S1_atBU763854--3e+0At5g49448CPuORF4 (Conserved peptide upstream open reading frame 4)O.I.H.G.S.X.
0.6986.80.98Gma.6104.2.S1_atBI320811--3e-20At5g63260zinc finger (CCCH-type) family proteinO.I.H.G.S.X.
0.6282.10.98Gma.6104.1.S1_x_atBU760692--8e-3At3g48440zinc finger (CCCH-type) family proteinO.I.H.G.S.X.
0.6080.70.98GmaAffx.71638.1.S1_atBE440902--2e-13At1g25280AtTLP10 (TUBBY LIKE PROTEIN 10)O.I.H.G.S.X.
0.6080.70.98Gma.15502.1.S1_atBG239077--3e-3At3g62940OTU-like cysteine protease family proteinO.I.H.G.S.X.
0.5979.50.98Gma.6890.1.A1_s_atBU550718--1e-1At2g31710unknown proteinO.I.H.G.S.X.
0.5374.20.98GmaAffx.61604.1.S1_atCA935525--1e-9At3g51370protein phosphatase 2C, putative / PP2C, putativeO.I.H.G.S.X.
0.5374.20.98GmaAffx.85830.1.S1_atAW569216--3e-26At1g23230unknown proteinO.I.H.G.S.X.
0.5273.10.98Gma.15910.1.S1_atAW351267--4e-44At5g58740nuclear movement family proteinO.I.H.G.S.X.
0.5273.10.98GmaAffx.22932.1.S1_atBI316684--1e-28At2g01060myb family transcription factorO.I.H.G.S.X.
0.4968.30.98Gma.10051.2.S1_atAW508986--2e-9At4g11790Ran-binding protein 1 domain-containing protein / RanBP1 domain-containing proteinO.I.H.G.S.X.
0.4867.70.99GmaAffx.85171.1.S1_atBU091668--7e-6At5g10710protein bindingO.I.H.G.S.X.
0.4867.70.98Gma.7218.2.S1_a_atBU762782--4e-12At1g67325binding / zinc ion bindingO.I.H.G.S.X.
0.4766.60.99GmaAffx.86122.1.S1_atBG155892--6e-19At3g51310VPS35C (VPS35 HOMOLOG C)O.I.H.G.S.X.
0.4766.60.98GmaAffx.90655.1.S1_s_atCF806380SGF14C-3e-32At2g42590GRF9 (GENERAL REGULATORY FACTOR 9)O.I.H.G.S.X.
0.4665.50.98Gma.18012.1.S1_atBM568411--8e-28At4g36690ATU2AF65AO.I.H.G.S.X.
0.4463.30.99Gma.6104.2.S1_a_atBI320811--3e-20At5g63260zinc finger (CCCH-type) family proteinO.I.H.G.S.X.
0.4463.30.98Gma.7264.2.S1_atBQ628490transcription factor bZIP87-6e-9At2g35530bZIP transcription factor family proteinO.I.H.G.S.X.
0.4360.60.98GmaAffx.86047.2.S1_atBI470601--2e-12At3g55830EPC1 (ECTOPICALLY PARTING CELLS)O.I.H.G.S.X.
0.4360.60.98Gma.1995.1.S1_atAW164508--4e-23At3g12760-O.I.H.G.S.X.
0.4259.30.98Gma.11094.2.S1_a_atBU546011--1e-10At2g14835zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.4259.30.98Gma.11129.1.S1_x_atBE657610--6e-119At3g05840ATSK12O.I.H.G.S.X.
0.4158.10.98GmaAffx.84527.1.S1_atCD410727--3e-8At2g26140ftsh4 (FtsH protease 4)O.I.H.G.S.X.
0.4057.10.99Gma.5720.1.S1_s_atAW348669--4e-5At1g51200zinc finger (AN1-like) family proteinO.I.H.G.S.X.
0.3954.50.98Gma.938.1.S1_atBE823359--6e-10At4g03020transducin family protein / WD-40 repeat family proteinO.I.H.G.S.X.
0.3650.80.98Gma.7683.1.S1_atBI968408--3e-28At2g02560CAND1 (CULLIN-ASSOCIATED AND NEDDYLATION DISSOCIATED)O.I.H.G.S.X.
0.3650.80.98GmaAffx.89525.1.S1_s_atCK606517--3e-26At2g39840TOPP4O.I.H.G.S.X.
0.3548.60.98Gma.8062.2.S1_a_atBG652071--4e-14At2g21630transport protein, putativeO.I.H.G.S.X.
0.3447.20.98Gma.2668.2.A1_atBE821049--4e-6At5g42520ATBPC6O.I.H.G.S.X.
0.3346.10.98GmaAffx.37668.2.S1_atBF424937--8e-21At3g51050FG-GAP repeat-containing proteinO.I.H.G.S.X.
0.3243.70.98GmaAffx.27367.1.S1_atBG653618--7e-9At1g79690atnudt3 (Arabidopsis thaliana Nudix hydrolase homolog 3)O.I.H.G.S.X.
0.3142.20.99Gma.3839.1.S1_atCD391787--2e-69At1g60780HAP13 (HAPLESS 13)O.I.H.G.S.X.
0.2839.00.98GmaAffx.90987.1.S1_atCF806712--1e+0At5g64750ABR1 (ABA REPRESSOR1)O.I.H.G.S.X.
0.2735.70.98Gma.9522.1.S1_atAW307593MYB transcription factor MYB107-6e-7At1g17520DNA-binding protein, putativeO.I.H.G.S.X.
0.2735.70.98GmaAffx.8927.1.S1_atAW349333--5e-32At4g39100SHL1 (short life)O.I.H.G.S.X.
0.2532.60.98Gma.11129.2.S1_x_atAW310162--8e-39At3g05840ATSK12O.I.H.G.S.X.
0.2430.90.98Gma.8209.1.S1_atBU546771--2e-47At5g58100unknown proteinO.I.H.G.S.X.
0.2126.60.98Gma.1782.2.S1_a_atBU579169--5e-7At5g15400U-box domain-containing proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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