Co-expression analysis

Gene ID GmaAffx.78968.2.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g39670: calcium-binding EF hand family protein (HF=9e-13)
Module size 6 genes
NF 0.58
%ile 88.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7187.80.95GmaAffx.78968.2.S1_atBM188587--9e-13At5g39670calcium-binding EF hand family proteinO.I.H.G.S.X.
0.8091.50.95GmaAffx.78968.1.S1_atBE820570--2e-12At5g39670calcium-binding EF hand family proteinO.I.H.G.S.X.
0.6080.70.95GmaAffx.62448.1.S1_atAW781631--3e+0At4g03510RMA1O.I.H.G.S.X.
0.6080.70.95GmaAffx.78968.2.S1_s_atBM188587--9e-13At5g39670calcium-binding EF hand family proteinO.I.H.G.S.X.
0.3751.70.95GmaAffx.59154.1.S1_atBG508624--7e+0At4g37685unknown proteinO.I.H.G.S.X.
0.3650.80.95GmaAffx.93046.1.S1_atCF808771--3e-1At5g62520SRO5 (SIMILAR TO RCD ONE 5)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
7.098.8GSM209598resistant_48hours_rep3GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO
4.597.7GSM209599susceptible_48hours_rep3GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO
3.496.4GSM29237044_1227.1F.R139U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.095.6GSM29232068_1189.1E.R115U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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