Co-expression analysis

Gene ID GmaAffx.78677.2.S1_at
Gene name
Homology with ArabidopsisSimilar to At1g48912: unknown protein (HF=8e-1)
Module size 29 genes
NF 0.21
%ile 44.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.98100.00.90GmaAffx.78677.2.S1_atBQ740303--8e-1At1g48912unknown proteinO.I.H.G.S.X.
0.6684.00.90GmaAffx.43702.1.S1_atAW309184--8e-1At4g11385unknown proteinO.I.H.G.S.X.
0.5273.10.93GmaAffx.66333.1.S1_atAW200709--4e-19At5g15120unknown proteinO.I.H.G.S.X.
0.4968.30.92GmaAffx.79189.1.S1_atBF596987--2e-11At5g39890unknown proteinO.I.H.G.S.X.
0.4665.50.96Gma.17177.1.S1_atBG551593--6e-9At5g41560-O.I.H.G.S.X.
0.3346.10.96GmaAffx.8320.1.S1_atBG157576--4e-13At1g79440ALDH5F1O.I.H.G.S.X.
0.3040.40.98GmaAffx.93612.1.S1_s_atCF806622--1e-53At1g78720protein transport protein sec61, putativeO.I.H.G.S.X.
0.2939.00.97Gma.2987.1.S1_atCD393690--2e-4At2g02510unknown proteinO.I.H.G.S.X.
0.2939.00.96Gma.17732.1.S1_x_atAW100760--3e-1At2g43510ATTI1O.I.H.G.S.X.
0.2633.90.98Gma.5576.1.S1_a_atCD417924MnSOD-7e-16At3g10920MSD1 (MANGANESE SUPEROXIDE DISMUTASE 1)O.I.H.G.S.X.
0.2430.90.96GmaAffx.45872.1.S1_atBM095149--2e-23At4g29220PFK1 (PHOSPHOFRUCTOKINASE 1)O.I.H.G.S.X.
0.2329.90.97Gma.17732.1.S1_atAW100760--3e-1At2g43510ATTI1O.I.H.G.S.X.
0.2126.60.98GmaAffx.38683.1.S1_atBQ611755--3e-2At5g62200embryo-specific protein-relatedO.I.H.G.S.X.
0.2025.10.97GmaAffx.92422.1.S1_atCF808147--8e-101At2g34250protein transport protein sec61, putativeO.I.H.G.S.X.
0.2025.10.98Gma.5576.1.S1_x_atCD417924MnSOD-7e-16At3g10920MSD1 (MANGANESE SUPEROXIDE DISMUTASE 1)O.I.H.G.S.X.
0.1822.30.98Gma.4428.1.S1_atBQ272792--5e-14At3g20920translocation protein-relatedO.I.H.G.S.X.
0.1822.30.97Gma.1890.1.S1_atBU549164--1e-8At1g70770unknown proteinO.I.H.G.S.X.
0.1721.20.98Gma.12215.1.S1_atBM307262--2e-12At5g27430signal peptidase subunit family proteinO.I.H.G.S.X.
0.1721.20.96GmaAffx.92422.1.S1_s_atCF808147--8e-101At2g34250protein transport protein sec61, putativeO.I.H.G.S.X.
0.1619.70.98Gma.11798.1.S1_s_atBM525482--8e-2At1g68680unknown proteinO.I.H.G.S.X.
0.1316.30.98Gma.6023.1.S1_atBQ611043--1e-4At1g14010emp24/gp25L/p24 family proteinO.I.H.G.S.X.
0.1316.30.97Gma.6610.1.S1_s_atCD407497--1e-3At2g02050NADH-ubiquinone oxidoreductase B18 subunit, putativeO.I.H.G.S.X.
0.1215.10.98GmaAffx.92984.1.S1_s_atCF808141Calmodulin (SCaM-3)-2e-1At3g08610unknown proteinO.I.H.G.S.X.
0.1114.20.95GmaAffx.68007.1.S1_atBG315709--4e-24At4g32690GLB3O.I.H.G.S.X.
0.1114.20.98Gma.3594.4.S1_a_atBF425858--8e-4At5g20500glutaredoxin, putativeO.I.H.G.S.X.
0.1013.00.97Gma.7186.3.S1_atBI786110--3e-34At2g40280dehydration-responsive family proteinO.I.H.G.S.X.
0.1013.00.95Gma.5505.1.S1_atBI942102--0At3g04120GAPC1 (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE C SUBUNIT 1)O.I.H.G.S.X.
0.0710.20.96GmaAffx.14408.1.S1_atAW597887--1e+0At5g05530zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.0710.20.96GmaAffx.78124.1.S1_atAI495608--3e-2At4g30920cytosol aminopeptidase family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.998.0GSM309530storage protein suppression expt, RNAi biol rep2, tech rep1GSE12314Storage Protein Suppression in Transgenic Soybean CotyledonsLink to GEO
4.998.0GSM309557storage protein suppression expt, RNAi biol rep1, tech rep2GSE12314Storage Protein Suppression in Transgenic Soybean CotyledonsLink to GEO
4.998.0GSM309527storage protein suppression expt, control tech rep1GSE12314Storage Protein Suppression in Transgenic Soybean CotyledonsLink to GEO
4.998.0GSM309528storage protein suppression expt, control tech rep2GSE12314Storage Protein Suppression in Transgenic Soybean CotyledonsLink to GEO
4.797.8GSM309531storage protein suppression expt, RNAi biol rep2, tech rep2GSE12314Storage Protein Suppression in Transgenic Soybean CotyledonsLink to GEO
4.797.8GSM309529storage protein suppression expt, RNAi biol rep1, tech rep1GSE12314Storage Protein Suppression in Transgenic Soybean CotyledonsLink to GEO
3.396.2GSM309342Wild type 2GSE12300Suppression of oleosin in soybean cotyledonLink to GEO
3.195.8GSM309341Wild type 1GSE12300Suppression of oleosin in soybean cotyledonLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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