Co-expression analysis

Gene ID	GmaAffx.78321.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At5g62810: PEX14 (HF=1e+0)
Module size	9 genes
NF	0.53
%ile	84.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.53	74.2	0.97	GmaAffx.78321.1.S1_at	BM309498	-	-	1e+0	At5g62810	PEX14	O.I.	H.G.	S.X.	Please select
0.71	87.8	0.98	GmaAffx.85162.1.S1_at	BI315839	MYB transcription factor MYB133	-	6e-22	At1g01520	myb family transcription factor	O.I.	H.G.	S.X.	Please select
0.61	81.8	0.98	GmaAffx.3741.1.S1_at	BM307322	-	-	7e-6	At5g26610	D111/G-patch domain-containing protein	O.I.	H.G.	S.X.	Please select
0.61	81.8	0.98	GmaAffx.644.2.S1_at	BG046072	-	-	6e-2	At3g29090	pectinesterase family protein	O.I.	H.G.	S.X.	Please select
0.57	78.8	0.98	GmaAffx.67700.1.S1_at	CB063625	-	-	9e-1	At5g13620	unknown protein	O.I.	H.G.	S.X.	Please select
0.47	66.6	0.98	Gma.15087.2.S1_at	CA800369	-	-	1e-94	At4g28860	ckl4 (Casein Kinase I-like 4)	O.I.	H.G.	S.X.	Please select
0.44	63.3	0.98	GmaAffx.73299.1.S1_at	BF597534	-	-	8e-3	At2g01680	ankyrin repeat family protein	O.I.	H.G.	S.X.	Please select
0.44	63.3	0.98	GmaAffx.83672.1.S1_at	BU926827	-	-	2e-51	At2g26000	zinc finger (C3HC4-type RING finger) family protein	O.I.	H.G.	S.X.	Please select
0.25	32.6	0.98	GmaAffx.26272.1.S1_at	BE330107	-	-	6e-36	At1g43190	polypyrimidine tract-binding protein, putative / heterogeneous nuclear ribonucleoprotein, putative	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.4	96.4	GSM293911	5_2236.2E.R249P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.3	96.2	GSM293060	61_C034.1N.R9N3P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.1	95.8	GSM294489	54_3198.2K.R9K3P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.1	95.8	GSM293718	53_2144.2C.R109P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.0	95.6	GSM293789	33_3058.2D.R9D1P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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