Co-expression analysis

Gene ID GmaAffx.77408.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At3g05680: EMB2016 (embryo defective 2016) (HF=2e-10)
Module size 10 genes
NF 0.34
%ile 61.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5979.50.96GmaAffx.77408.1.S1_atCA784085--2e-10At3g05680EMB2016 (embryo defective 2016)O.I.H.G.S.X.
0.5071.70.97Gma.10758.1.S1_s_atCD411519--5e-3At5g55660-O.I.H.G.S.X.
0.3853.30.97Gma.1425.1.S1_x_atCD392549--6e-26At5g06770KH domain-containing protein / zinc finger (CCCH type) family proteinO.I.H.G.S.X.
0.3751.70.97GmaAffx.61844.1.S1_atAW100138--1e+0At5g4643060S ribosomal protein L32 (RPL32B)O.I.H.G.S.X.
0.3751.70.97Gma.1425.1.S1_atCD392549--6e-26At5g06770KH domain-containing protein / zinc finger (CCCH type) family proteinO.I.H.G.S.X.
0.3346.10.97GmaAffx.63310.1.S1_atBU084641--3e+0At5g53050hydrolase, alpha/beta fold family proteinO.I.H.G.S.X.
0.2939.00.97Gma.10486.1.S1_atCD411021--1e-88At4g09980EMB1691 (EMBRYO DEFECTIVE 1691)O.I.H.G.S.X.
0.2329.90.97GmaAffx.2282.1.A1_atBU551265--5e+0At4g19160unknown proteinO.I.H.G.S.X.
0.2025.10.97GmaAffx.73873.1.S1_atBQ298926--2e+0At5g5729060S acidic ribosomal protein P3 (RPP3B)O.I.H.G.S.X.
0.1721.20.97GmaAffx.65643.1.S1_atAW781425--6e-4At3g26990-O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
7.398.9GSM309344transgenic RNAiOleosin, biol rep 1, tech rep 2GSE12300Suppression of oleosin in soybean cotyledonLink to GEO
7.198.8GSM309343transgenic RNAiOleosin, biol rep 1, tech rep 1GSE12300Suppression of oleosin in soybean cotyledonLink to GEO
5.998.5GSM309342Wild type 2GSE12300Suppression of oleosin in soybean cotyledonLink to GEO
5.998.5GSM309341Wild type 1GSE12300Suppression of oleosin in soybean cotyledonLink to GEO
5.798.4GSM309557storage protein suppression expt, RNAi biol rep1, tech rep2GSE12314Storage Protein Suppression in Transgenic Soybean CotyledonsLink to GEO
5.598.3GSM309345transgenic RNAiOleosin, biol rep 2, tech rep 1GSE12300Suppression of oleosin in soybean cotyledonLink to GEO
5.498.2GSM309528storage protein suppression expt, control tech rep2GSE12314Storage Protein Suppression in Transgenic Soybean CotyledonsLink to GEO
5.398.2GSM309346transgenic RNAiOleosin, biol rep 2, tech rep 2GSE12300Suppression of oleosin in soybean cotyledonLink to GEO
5.398.2GSM309530storage protein suppression expt, RNAi biol rep2, tech rep1GSE12314Storage Protein Suppression in Transgenic Soybean CotyledonsLink to GEO
5.398.2GSM309529storage protein suppression expt, RNAi biol rep1, tech rep1GSE12314Storage Protein Suppression in Transgenic Soybean CotyledonsLink to GEO
5.398.2GSM309527storage protein suppression expt, control tech rep1GSE12314Storage Protein Suppression in Transgenic Soybean CotyledonsLink to GEO
4.897.9GSM309531storage protein suppression expt, RNAi biol rep2, tech rep2GSE12314Storage Protein Suppression in Transgenic Soybean CotyledonsLink to GEO
3.897.0GSM258504Soybean shoot apical meristem, 4 short-day replicate BGSE10251Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeansLink to GEO
3.696.7GSM258499Soybean shoot apical meristem, 4 short-day treatmentGSE10251Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeansLink to GEO
3.696.7GSM258497Soybean Shoot Apical Meristem, 1 short-day treatmentGSE10251Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeansLink to GEO
3.496.4GSM258498Soybean shoot apical meristem, 2 short-day treatmentGSE10251Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeansLink to GEO
3.496.4GSM258501Soybean shoot apical meristem, 1 short-day treatment replicate BGSE10251Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeansLink to GEO
3.396.2GSM258503Soybean shoot apical meristem, 2 short-day replicate BGSE10251Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeansLink to GEO
3.396.2GSM258502Vegetative shoot apical meristem, replicate BGSE10251Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeansLink to GEO
3.396.2GSM258500Soybean shoot apical meristem, 6 short-day treatmentGSE10251Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeansLink to GEO
3.296.0GSM258496Vegetative soybean shoot apical meristemGSE10251Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeansLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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