Co-expression analysis

Gene ID	GmaAffx.75978.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At1g36730: eukaryotic translation initiation factor 5, putative / eIF-5, putative (HF=5e-18)
Module size	11 genes
NF	0.33
%ile	60.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.50	71.7	0.97	GmaAffx.75978.1.S1_at	AW755994	-	-	5e-18	At1g36730	eukaryotic translation initiation factor 5, putative / eIF-5, putative	O.I.	H.G.	S.X.	Please select
0.44	63.3	0.98	GmaAffx.49506.1.S1_at	BF009815	-	-	2e+0	At2g19760	PRF1 (PROFILIN 1)	O.I.	H.G.	S.X.	Please select
0.42	59.3	0.97	GmaAffx.70093.1.S1_at	AW666289	-	-	2e-6	At4g33210	F-box family protein (FBL15)	O.I.	H.G.	S.X.	Please select
0.38	53.3	0.98	GmaAffx.15284.1.S1_at	BE822730	-	-	6e+0	At1g21880	LYM1 (LYSM DOMAIN GPI-ANCHORED PROTEIN 1 PRECURSOR)	O.I.	H.G.	S.X.	Please select
0.35	48.6	0.97	GmaAffx.15284.2.S1_at	BU927192	-	-	9e-1	At5g12880	proline-rich family protein	O.I.	H.G.	S.X.	Please select
0.33	46.1	0.98	GmaAffx.69670.1.S1_at	BQ742118	-	-	7e-5	At4g22670	AtHip1 (Arabidopsis thaliana Hsp70-interacting protein 1)	O.I.	H.G.	S.X.	Please select
0.29	39.0	0.98	GmaAffx.88368.1.S1_at	CA801738	-	-	2e-8	At3g50670	U1-70K (U1 SMALL NUCLEAR RIBONUCLEOPROTEIN-70K)	O.I.	H.G.	S.X.	Please select
0.29	39.0	0.98	GmaAffx.42424.1.S1_at	AW756256	-	-	2e-45	At5g19330	armadillo/beta-catenin repeat family protein / BTB/POZ domain-containing protein	O.I.	H.G.	S.X.	Please select
0.25	32.6	0.98	Gma.15407.4.S1_at	AW185051	-	-	1e-21	At5g52040	ATRSP41	O.I.	H.G.	S.X.	Please select
0.24	30.9	0.97	GmaAffx.67700.1.S1_at	CB063625	-	-	9e-1	At5g13620	unknown protein	O.I.	H.G.	S.X.	Please select
0.22	28.1	0.98	GmaAffx.82.1.S1_at	CD415578	-	-	9e-8	At3g10210	-	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.1	97.3	GSM293060	61_C034.1N.R9N3P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.6	96.7	GSM294132	86_3112.2G.R9G1P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.5	96.6	GSM292768	30_C198.1K.R9K3P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.4	96.4	GSM293911	5_2236.2E.R249P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.2	96.0	GSM292959	38_C232.1M.R9M3P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.1	95.8	GSM294075	31_3126.2G.R9G3P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.1	95.8	GSM294244	92_2340.2H.R202P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.1	95.8	GSM294293	45_3162.2I.R9I3P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.0	95.6	GSM294059	17_3118.2G.R9G2P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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