Co-expression analysis

Gene ID GmaAffx.75577.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At1g06620: 2-oxoglutarate-dependent dioxygenase, putative (HF=1e-9)
Module size 8 genes
NF 0.41
%ile 71.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9399.10.98GmaAffx.75577.1.S1_atAW279266--1e-9At1g066202-oxoglutarate-dependent dioxygenase, putativeO.I.H.G.S.X.
0.5576.30.99GmaAffx.89144.1.A1_s_atCK605580--2e-21At3g60600VAP (VESICLE ASSOCIATED PROTEIN)O.I.H.G.S.X.
0.5071.70.99GmaAffx.34491.1.S1_atBE820865--9e-13At1g16360LEM3 (ligand-effect modulator 3) family protein / CDC50 family proteinO.I.H.G.S.X.
0.4057.10.99GmaAffx.33620.2.S1_atBM731339--2e-14At1g51730RWD domain-containing proteinO.I.H.G.S.X.
0.3650.80.99Gma.2238.1.S1_atBM893125--4e-76At3g55620emb1624 (embryo defective 1624)O.I.H.G.S.X.
0.3040.40.99GmaAffx.92769.1.S1_s_atCF808494--1e-75At3g19760eukaryotic translation initiation factor 4A, putative / eIF-4A, putative / DEAD box RNA helicase, putativeO.I.H.G.S.X.
0.2939.00.99Gma.1651.1.S1_atCD395076--4e-1At3g17880ATTDX (TETRATICOPEPTIDE DOMAIN-CONTAINING THIOREDOXIN)O.I.H.G.S.X.
0.2329.90.98GmaAffx.82.1.S1_atCD415578--9e-8At3g10210-O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage