Co-expression analysis

Gene ID	GmaAffx.74959.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At5g24080: protein kinase family protein (HF=5e-3)
Module size	10 genes
NF	0.36
%ile	64.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.53	74.2	0.96	GmaAffx.74959.1.S1_at	CA936869	-	-	5e-3	At5g24080	protein kinase family protein	O.I.	H.G.	S.X.	Please select
0.56	78.2	0.97	GmaAffx.997.1.S1_at	BG363059	-	-	8e-1	At2g27535	ribosomal protein L10A family protein	O.I.	H.G.	S.X.	Please select
0.48	67.7	0.96	Gma.5574.1.S1_s_at	BI426378	-	-	2e-3	At1g15520	PDR12 (PLEIOTROPIC DRUG RESISTANCE 12)	O.I.	H.G.	S.X.	Please select
0.36	50.8	0.96	Gma.4927.1.S1_at	BG510284	-	-	7e-3	At4g15236	ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding	O.I.	H.G.	S.X.	Please select
0.34	47.2	0.97	Gma.1824.1.S1_at	BI469795	-	-	7e-16	At5g26030	FC1 (ferrochelatase 1)	O.I.	H.G.	S.X.	Please select
0.33	46.1	0.96	GmaAffx.1301.51.S1_at	AI938957	-	-	2e+0	At1g76610	unknown protein	O.I.	H.G.	S.X.	Please select
0.32	43.7	0.96	Gma.11486.1.A1_at	BG511169	-	-	3e+0	At2g44400	DC1 domain-containing protein	O.I.	H.G.	S.X.	Please select
0.28	39.0	0.96	Gma.8437.1.S1_at	AY247754.1	Calcium-dependent protein kinase SK5	-	8e-23	At5g23580	CDPK9 (CALMODULIN-LIKE DOMAIN PROTEIN KINASE 9)	O.I.	H.G.	S.X.	Please select
0.26	33.9	0.97	GmaAffx.17811.1.S1_at	BI426517	-	-	2e-3	At1g54730	sugar transporter, putative	O.I.	H.G.	S.X.	Please select
0.20	25.1	0.97	Gma.3924.1.S1_at	BI497844	-	-	1e-7	At3g43740	leucine-rich repeat family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.1	95.8	GSM294047	96_3095.2F.R9F1L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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