Co-expression analysis

Gene ID	GmaAffx.74681.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At1g26140: unknown protein (HF=4e-1)
Module size	6 genes
NF	0.08
%ile	24.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	86.1	0.92	GmaAffx.74681.1.S1_at	BU550733	-	-	4e-1	At1g26140	unknown protein	O.I.	H.G.	S.X.	Please select
0.55	76.3	0.93	GmaAffx.74681.3.S1_at	BQ610580	-	-	2e-1	At1g26140	unknown protein	O.I.	H.G.	S.X.	Please select
0.11	14.2	0.94	GmaAffx.87757.1.S1_at	BI425898	MYB transcription factor MYB139	-	2e-2	At3g46130	MYB111 (MYB DOMAIN PROTEIN 111)	O.I.	H.G.	S.X.	Please select
0.08	11.0	0.95	GmaAffx.343.1.S1_at	CA938606	-	-	1e-4	At5g24920	AtGDU5 (Arabidopsis thaliana GLUTAMINE DUMPER 5)	O.I.	H.G.	S.X.	Please select
0.06	9.0	0.94	GmaAffx.23289.1.S1_at	CD392087	-	-	4e-1	At5g56280	CSN6A	O.I.	H.G.	S.X.	Please select
0.03	5.8	0.94	GmaAffx.14030.1.S1_at	BE021503	-	-	3e-2	At1g23120	major latex protein-related / MLP-related	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO

Inter-species module comparison

A co-expression module including the grape gene, 1620698_at, orthologous to the query gene, GmaAffx.74681.1.S1_at

VF	%ile	Gene ID	Repr. ID	Gene Name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.84	94.8	1620698_at	At1g26140	hypothetical protein LOC100247879	-	5e-2	At1g65900	unknown protein	O.I.	H.G.	S.X.	Please select
0.36	50.7	1617899_at	At1g26140	hypothetical protein LOC100252595	-	3e-5	At2g35120	glycine cleavage system H protein, mitochondrial, putative	O.I.	H.G.	S.X.	Please select
0.14	14.4	1609977_at	At1g26140	hypothetical LOC100254008	-	4e+0	Atmg01120	-	O.I.	H.G.	S.X.	Please select
0.14	14.4	1610313_at	At1g26140	hypothetical protein LOC100264623	-	1e+0	At1g75080	BZR1 (BRASSINAZOLE-RESISTANT 1)	O.I.	H.G.	S.X.	Please select
0.09	9.4	1612290_s_at	At1g26140	hypothetical protein LOC100251359	-	1e-38	At3g49310	-	O.I.	H.G.	S.X.	Please select
0.07	7.8	1613462_at	At1g26140	hypothetical protein LOC100266500	-	4e-32	At2g04280	unknown protein	O.I.	H.G.	S.X.	Please select
0.05	6.0	1614795_at	At1g26140	hypothetical protein LOC100245048	-	7e-74	At3g46440	UXS5	O.I.	H.G.	S.X.	Please select
0.05	6.0	1613401_at	At1g26140	hypothetical protein LOC100251358	-	4e+0	At4g30380	EXLB2 (EXPANSIN-LIKE B2 PRECURSOR)	O.I.	H.G.	S.X.	Please select
0.04	5.2	1616573_at	At1g26140	similar to Callose synthase 3	-	5e-14	At1g05570	CALS1 (CALLOSE SYNTHASE 1)	O.I.	H.G.	S.X.	Please select

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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